Cuculus canorus (common cuckoo): 104055249
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Entry
104055249 CDS
T08597
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104055249 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104055249 (MYO5C)
04131 Membrane trafficking [BR:
cuca04131
]
104055249 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104055249 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104055249 (MYO5C)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104055249 (MYO5C)
mRNA cycle factors
P-body specific factors
104055249 (MYO5C)
Membrane trafficking [BR:
cuca04131
]
Others
Actin-binding proteins
Myosins
104055249 (MYO5C)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104055249 (MYO5C)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104055249 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF3450
Csm1_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104055249
NCBI-ProteinID:
XP_053934002
LinkDB
All DBs
Position
12:3381106..3422203
Genome browser
AA seq
1735 aa
AA seq
DB search
MALPGLYAQYNRVWIPDSEEVWQSAEITKNYKAGDRFLSVRLEDGTELNYAVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHMEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAVQPEFKQLKLGSAEEFNYTRMGGNTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVGIKAVGDERSSISLEDKHLNIFCE
LLDLNCDKMAQWLCHRKIMTTSETVIKPMTRAQAVNARDALAKKIYSHLFDFVVERINEA
LQFPGKQHTFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVDKNAFFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDNPVSVSPF
SSTISIKSARPVLKSPNKQLRMTVGSKFRSSLSLLMATLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRNACIVIQKSVRGWLQRKKFLRVK
QAAVIVQQYFRGQRTIRQAITARTLKQTWAAIVIQKYCRGYLVRRIYQLIQVAAVTIQAY
TRGFLARKKYRKMFEEYKAVILQKHARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKVEE
QSRENHGLLERLTSLASTHMNDMNTIQKLQLDLEKLTAEKSIYENERKKYKEDTEQKILE
LEIQNKELQNQKEILEIKLQEKNEEMKEKMDDLTKQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIESLKGEIKDLKEEKNWLQHQIQQETVIQDGLKMEVGQLAKQAEKIPELQKEIEL
LQTQKLDVEKQSQSQKRELREKMSEVTKQLLESYDFDDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVMESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQISELENQKLDLENRLQEQTVKLKEMSNRLHYELEDRKQTRTNE
AQNEMDIKEKETLKVTTQEIEGLSNGLNQDEILNGVKSKIKHETTRLTVENMDLEEKLDM
KDRIIKKLEDQIKTLTKAIEKTEAPVPTSTKEYVGMMEYKKEDEERIIQNLILDLKPRGV
VVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLSN
TYYFLNCLKQYSGEEEFMKCNTPRQNKNCLKHFDLSEYRQILSDLSIRIYQQFIIVMENN
IQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNGL
DSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSNA
KETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIIKILNSYTPIDDFEKRVTPSF
VRKVQAMLNNREDVPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGFLTRV
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccgggctgtacgcgcagtacaacagggtttggatccctgatagtgaagaa
gtttggcagtctgcagaaatcacaaaaaactataaagctggagaccgttttctctctgtg
cgattagaagatggaactgaactgaattacgctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggtgaaaatgacctcactgcactcagttatctccacgag
ccagctgttctacacaatcttaaagttcgttttgtggagtctaagcttatctacacctat
agtggaataattttggttgcaataaacccctataaacaattgccaatatatggagatgct
attatccacgcatatagtggccaaaacatgggagacatggatccacatatatttgctgtg
gcagaagaagcatacaagcagatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagaccgtgtctgcaaggtacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacacatggaggataaagtactggcatccaatccaata
accgaggctgttggtaatgcaaaaaccacgcggaatgataatagcagtcggtttgggaaa
tacactgaaatcagttttgatcaaagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcagagaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctgtgcaacctgaatttaagcaacttaaattgggaagcgca
gaagaatttaactacacaagaatgggtggcaacacagtaatagaaggagttgatgataga
gcaaatatggtggagactcagaagacgtttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgttggcagcaattctacacttaggcaacgtaggaataaaggct
gttggagatgaaagatcatccatcagtctggaagataaacatcttaatatattctgtgaa
cttctggatttgaactgtgacaaaatggcacagtggttgtgccaccgaaagattatgact
acctcggagaccgtaataaagccaatgacaagagctcaggctgttaatgcaagggatgct
ctggcaaagaagatctattctcatttatttgactttgttgtggaaagaattaatgaagct
ttgcagttccctggcaagcaacatacttttattggtgttttggacatttatggctttgaa
acgtttgatatcaacagttttgagcaattttgcattaattatgctaatgaaaaactgcag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttctatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagagcttctggatgaagaatgcttgttacctcatggtacagatgaaaac
tggcttcaaaagctatataataattttgttgataaaaatgcattctttgaaaagccaagg
atgtcaaacacgtctttcatcattcaacacttcgctgataaggtagaatataaatgcgaa
ggatttctggaaaaaaacagggatacagtacatgaagtattgatagaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacaatccagtgtccgtttcacctttc
agttcaactatcagcatcaagtctgcaagacctgttctcaagtcacctaacaaacagctc
cggatgactgtgggcagtaagttccggagttctttgtctttacttatggcgacactcaat
gcaaccacccctcattatgtacgatgcataaagccaaatgatgagaagctgccttttgag
tttgattcaaaaagagtggctcagcaactgcgagcatgtggtgttttggagactattcgg
attagcgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attctcatgacacagcaggaactttccataaatgataagaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcataaccaatatcagtttgggagaacaaaaattttcttc
agagctggacaggttgcttacttagaaaaactgcgatctgataaactgagaaacgcatgc
atcgtgattcaaaagagtgttcgcggatggctgcagcggaagaaattccttcgtgtaaaa
caagcagctgttatagtacagcagtatttccgaggacagcggaccatacggcaagccata
actgcaagaactctgaagcaaacgtgggcagctattgttattcagaaatactgtcgaggt
tacctggtccgtagaatttaccagctcatccaggtggctgctgtaacaattcaagcttat
acaagaggatttctagcaagaaaaaaatatcggaagatgtttgaagaatacaaggcagtg
atccttcagaagcacgcccgtgcgtggcttgccaggcgcagatttcagaatattcggcgg
tttgtattgaatatccaactctcatacagagttcagcaactgcagaaaaaggtggaagaa
cagagtagagaaaatcatggtttactggagcgattgaccagtctggcttcaactcatatg
aacgacatgaatacaattcagaaactccagttagatcttgaaaagttaactgctgagaag
agcatatatgaaaatgaaaggaaaaaatataaagaggacactgaacagaaaatcttagaa
cttgagattcagaataaagagttacaaaaccagaaggagatcttggaaataaaactccaa
gaaaaaaatgaggaaatgaaagagaaaatggatgacctcacgaagcagctcttcaatgat
gtacaaaaagaagaaaatcagagaatgatacttgagaaaaatttccaaaatcagaaacag
gactatgaaaaggagattgaatcgcttaagggagaaattaaagatctgaaagaagaaaaa
aattggctacaacatcaaattcagcaagaaactgtcattcaggatggcttgaagatggaa
gtagggcaactagcaaaacaagcagagaaaatacctgagttgcaaaaggaaattgaactg
ctacagacacaaaaattggatgttgaaaagcagtcccagtcacagaagcgagaattgagg
gaaaagatgtcagaagttacgaaacagcttcttgaaagttatgattttgatgatgtgaga
agcagactttctacagaggatttggaacacttaaatgaagatggagaactgtggtttgct
tatgagggcttgaaaaaggctacaagagtaatggaaagccatttccaatctcagaaggaa
atatatgaaaaggagattgaaggtttgaattttaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcaggctaacttcagaaaacctggtgatcccagatcttaaacagcaaatttctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaggaacagactgtaaaattgaaa
gagatgtctaaccggctgcattatgaactagaggatagaaaacaaacacgaacaaatgag
gcccagaatgaaatggacataaaagaaaaagagacactgaaagtcacaacccaagaaatt
gaaggactgagcaatggtttgaatcaagatgaaatcctgaatggagtaaaaagcaagata
aagcacgaaacaactcgacttactgtagaaaacatggatcttgaagaaaaactagacatg
aaagatagaatcataaagaaattggaggatcagatcaaaactcttaccaaggctattgaa
aaaactgaagctcctgtgccaacttcaaccaaagagtacgttggaatgatggagtacaaa
aaagaggatgaagaaaggatcattcaaaatctgatccttgatttaaagccacgtggagtt
gtagtcaatatgatacctggccttccagctcacatcctattcatgtgtgtgaggtatgca
gattatctgaatgatgctgacatgctgaaatctttcatgaacgtaactattgatggtatc
aaacaagttgttaaggagcattcagaagactttgagatgttgtccttttggctttccaac
acatactattttcttaactgtttgaagcagtacagcggggaagaggaatttatgaagtgt
aacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacagacag
attcttagtgatttgtctattcgcatctatcaacaattcattattgtaatggagaacaac
attcagcccatgattgtaccaggcatgctggaatatgagagtcttcagggaatttctggc
ttgaaacctacagggttccgtaaacgttcctctagtatagatgacacggatacctacaca
atgacctctatcctgcaacagctcagctacttttatagtactatgtgccagaatggcttg
gactctgagcttttaaagcaggcagtgaagcagcttttttttctgattggagctatcacc
ctcaacagtctcttcctccgcaaggacatgtgctcctgcagaaaaggaatgcagataaga
tgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaatgcc
aaagaaaccttggagcctctgtctcaagcagcgtggctccttcaggtcaaaaagatcaca
gatgatgatgccaaggaaatatgcgaacactgcacatctctttcaactgtgcagataatt
aagatcctcaactcatacactccaatagatgattttgagaaaagagtgactccatcattt
gttcgtaaagtccaggctatgctaaacaatcgtgaggatgttccgcagttgatgctggat
accaaatatctctttcaagtgacgtttcctttcaccccctctccacatgccttggaaatg
atacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
DBGET
integrated database retrieval system
