Cuculus canorus (common cuckoo): 104055352
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Entry
104055352 CDS
T08597
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104055352 (DDX10)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104055352 (DDX10)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Helicases
104055352 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
104055352
NCBI-ProteinID:
XP_053912471
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All DBs
Position
1:5964404..6156051
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AA seq
873 aa
AA seq
DB search
MGRAGGDGAEVDPVRSFERWKKKYTRRTKRLRLQRKERQKPEWQVEREGIGRLVQRYPGI
NPSEIERFSDFPLSKKTLKGLQEAQYRLVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAF
IVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGGKDLKE
ETERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENL
PKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLGQNYVVCELQQKVNM
LYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPLLALHGKQHQMKRMEVYTCFVR
KKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSE
EKGMVEQLAQRKVPISEIKINPEKLTDIQKRMQAFLAQDQELKDKAQRCFVSYLRSVYLM
KNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLCANEAADGMDRLKETEQNKNTI
SLINSEGVEKCETNFSGKASSKKTKAKERRKETEECPASSEGDEESGESEDDSKEVIEEE
EEKEIPVSSSVQNPDSMQFFEDDDDDDDDDAKDLDLLTVKRRNVFGIDAKDNPAPNESKS
KMKKKTTKTQEAKKILKKKFKVNTKIVFNEDGELVQQWPPVQKSSLAKADEEDDASGINL
DKAKEILREEDKFDKEEYRKKIKEKHREKRLKEKAARREARNKNAQAEEETVAFLAHSGS
EEEFDPSTLPDPDKYRDSDEEQDSVSEDSCSELEEKSGRKKRSYSNSDAAEEMPLKRKKA
KFSQEEDPYLPLDTGLSLAEDEELVLHLLNSQS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggccggcggggacggggcggaggtggacccggtgcgcagcttcgagcgctgg
aagaagaaatacacgcggcggaccaagaggctgcggctgcagcgcaaggagaggcagaag
cccgagtggcaggtggagagggagggcatcggccgcctggtgcagcgctaccccgggata
aatccaagtgaaattgaaagattttcggactttcctctgtcaaagaaaaccctaaaagga
ttgcaggaagctcagtatcgcttggtaacggagatacagaggcaaaccataggtttggct
ttacaaggtaaagatgtgcttggagctgcaaagactggatcaggcaaaaccttggctttt
attgtcccagctttggaactcctgtatcgccagcagtggacttcagctgatgggctagga
gttttgataatatcacctacccgggaattggcgtatcaaaccttcaaggttctgcgtaaa
gtgggaaagaatcatgagttctcagctggccttatcattggaggaaaggatctgaaagaa
gagactgaaagaatccaccacataaatatgctaatttgcactccaggacggcttctgcag
cacatggatgaaacttcatatttctatgcttctgatctgcaaatgttgattcttgatgaa
gctgatagaatcctagacatggggtttgctgatacaatgaacgcaatcatagaaaatcta
cctaagaaacgccagaccttgcttttttctgcaacgcaaacaaaatccgtgaaggatctt
gcacgactgagtctgaaagatccggaatatgtttgggttcatgagaaagccaagttcagt
accccggcaacattgggtcagaactatgttgtctgtgagctccagcaaaaagtaaacatg
ctgtactctttcctgagaagtcacttgaagaagaagagcattgtgttttttgcaagctgt
aaagaggtccagtatctattcagagtgttctgtaagcttcagcctggtcttcctctgctg
gcgctccatggcaagcagcatcagatgaaaagaatggaagtctacacttgttttgttcgg
aaaaaggcagcagtactttttgctacagatattgcagctcgtggcctggattttccagca
gttaactgggtcattcagtttgattgtccggaagatgcaaacacatacatccacagagtg
ggaagaacagccaggtacaaagaaggcggtgaagctttgctggtattgcttccttcagaa
gaaaaaggaatggtggaacagctggcacagaggaaagtacctatcagtgaaatcaaaatt
aatcctgaaaagcttacagacattcaaaaaaggatgcaagctttcttagctcaagaccag
gagttaaaagacaaagctcaaaggtgttttgtatcctacctgcgttcagtttacctaatg
aagaataaggaagtatttgatgttttcaagttgcctctagcagaatatgccctatccctt
ggtcttgcaatggcacctcgtgtgagatttcttcaaaaagtacaaaaacagttgtgtgca
aatgaggcagcggatgggatggatcgcttgaaggaaacagagcaaaataaaaataccatc
tccttgataaacagtgaaggagtggagaaatgtgaaactaatttcagtggaaaggcgtct
tctaaaaaaacaaaggcaaaggagagaaggaaagaaactgaggagtgtcctgcttccagt
gaaggtgatgaggagagtggtgagtctgaggatgactcgaaagaggtaattgaggaggag
gaggaaaaagaaattcctgtatcaagcagtgttcaaaacccagactccatgcagttcttt
gaagatgatgatgatgacgatgatgatgatgctaaagatcttgatttactgacagtgaaa
cgacggaatgtttttggtattgacgctaaagataatccagcaccgaatgagtcaaaatca
aaaatgaagaaaaaaacaactaaaacccaagaagccaaaaaaattttaaagaagaaattc
aaagtcaacacgaaaatagtttttaatgaagatggggagttagtgcagcagtggccacct
gtgcaaaaatccagtttggcgaaagcagatgaggaagatgatgccagtggtatcaactta
gataaagcgaaagagatactgcgggaagaagataaatttgacaaagaagaatacaggaag
aaaataaaggaaaaacatagggagaaaaggctgaaggaaaaagcagcaaggagagaagcc
aggaataagaatgcacaggctgaagaggaaacagtggcctttcttgctcacagtggaagt
gaagaagagtttgatccgagtactcttccagatcctgataaatacagagattctgatgaa
gagcaggattcagtaagcgaagacagctgtagtgaacttgaggaaaagagtggaagaaag
aagagaagctatagcaacagtgacgcagcagaagaaatgccactgaaaagaaagaaggca
aaattcagccaagaggaggacccctatttgccattagatactgggctttctctggcagag
gatgaagagcttgtactacatctgctcaacagtcagagctaa
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