Cuculus canorus (common cuckoo): 104055375
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Entry
104055375 CDS
T08597
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104055375 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104055375 (RPAP2)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104055375 (RPAP2)
Protein phosphatases and associated proteins [BR:
cuca01009
]
HAD phosphatases
Fcp/Scp phosphatases
104055375 (RPAP2)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104055375 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
104055375
NCBI-ProteinID:
XP_053929766
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All DBs
Position
8:34382318..34419389
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AA seq
694 aa
AA seq
DB search
MCETLHKEEPHNPSFPITPAELPLPTHLPAPLPPLLNTARPRAAPAPSPTPHTRRPLRTH
RPSLRPSRGPAPGVRGRGAACAAVMAAGAPRGKAGRRRAGSKHSAALKNEDPAQRKVALE
SALRKKIEFEKKALHIVEELLEEDITEEFLLNSGKCITPSHYKDVVDERSIIKLCGYPLC
QNKLENVPKQKYRISTKTNRVYDITERKCFCSNFCYKASKYFEAQISKSPVWMREEEEPP
DIELLKEGQSGSSGEEMKIRDEVIKVSDIENPRISSKLSEFGSHDTASDSSSDSEQDFVS
SVLPGSQSRSAGVAQQLHRSSILRKQHDPKDFSSPKTEDTDVVEATEQLSNCKLGAQEEV
YAGSVHNKITAMSSESISLGKSGAAENYENTRSGSQVVFLGVSRRGAEHLKRILANSKEH
NKSILRNPVNSKGSLLEVLKQTLKEWRTEETMKFLYGPNYASLRSSKHVSSAKQENEELD
EDDLDAADDLNTAAVGLSENSLNYSLPFTSPGGIVKPVPSYKKLKEETEFLELRVREFYK
GKCILAEEAATQAQAEEHPSKGKEEQQEDLIFPLVDSTAQMQIRKRIVLEKLRKALPAVL
GPLQIAPGDVYTELKNLVKTFQLTNRNIIHKMPEWTLIAIVLLSVLSQHTPVFKTTQASP
TYTQFLTTLLEELHFKSEDLESLTSIFGKDSLLD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaccctccacaaagaggagccacacaacccctcttttccgataacgcccgcc
gagctccccctccccacgcacctccccgctccgctacctcccctcctcaacaccgcccgg
ccccgggccgcaccggctccttcccccacgccccacacacgccgccctctccgtacccac
cgcccctcgctccgcccgagccgcggccccgcccccggggtcagaggtcgcggggcggcg
tgcgcggcagtgatggcggcgggggcgccgcggggcaaggccggccggcggcgcgcaggc
agtaagcattcagctgctctgaagaacgaagatcctgctcagaggaaagtagctctggag
tctgctttgagaaagaagattgaatttgagaagaaagcattgcatattgttgaagaactc
ctggaagaggacattactgaagagttccttctgaactctggaaaatgtattaccccatca
cactataaagatgttgttgatgaacggtctatcatcaaactatgcggttatcctctgtgt
caaaataaactggaaaatgtgccaaaacagaagtacaggatttcaacaaaaaccaacaga
gtttatgatatcactgaaagaaagtgcttttgcagtaacttttgctataaagcatctaaa
tattttgaagctcaaatttccaaaagtccggtatggatgcgagaagaggaggagccacca
gacatagaactgctgaaggagggacagagtggatcatctggagaagagatgaaaatacgt
gatgaagtaattaaagtttctgacattgaaaatcctaggatatcttcaaagctatctgaa
tttggttctcatgacacagccagtgacagcagtagtgatagtgaacaagattttgtttct
tctgtcctgcctggaagccagtcccgttcagctggtgttgcacagcagttgcacagaagc
agcatcctcagaaagcagcatgatccaaaagacttctccagccctaaaactgaagacaca
gatgtggtagaagccactgaacaactatctaattgtaaattaggcgctcaggaagaagta
tatgctggctctgttcataataaaataactgcaatgtcttcagaaagtatttctctagga
aaatcaggtgctgcagaaaactatgaaaacacacgtagtggctcacaggtagtttttcta
ggtgtgagcagaagaggggctgaacatcttaaaagaatcttagctaactcaaaagaacat
aacaaatcgatactgaggaatccagtgaattccaaaggcagtttattagaagtgcttaaa
caaacacttaaagaatggagaactgaggaaactatgaaatttctctatggcccaaactat
gcttctttacgctcatccaaacatgtgtcatctgccaagcaggagaatgaagaacttgat
gaggatgacttggatgcagctgatgatctcaacactgctgctgtagggctgtctgagaac
agtttgaactactcactacctttcacgagcccaggaggaatagttaagcctgtgccgagt
tacaaaaagctaaaagaagaaacagagttcctagaactccgagtgagagagttctataaa
ggaaagtgcatcttggcagaagaggcagcaactcaggcacaagcagaggaacatccaagc
aaaggcaaagaggagcaacaggaagatctcatcttcccacttgttgattcaactgcacaa
atgcagattagaaagcgaattgtccttgaaaaactgagaaaagcattgcctgcagttctg
ggccctcttcagattgctccaggtgatgtttacacagagctgaaaaatcttgtcaaaacc
ttccagttaacaaacagaaatattattcacaagatgcctgaatggactctaattgcaata
gttttgttatcagtactgtcacaacatactccagttttcaagaccactcaggccagtcca
acgtatacccagttcctgactacattgctggaagaactgcacttcaaaagtgaagatctg
gaaagtctgacaagcatctttgggaaggacagcctgcttgactga
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