Cuculus canorus (common cuckoo): 104055406
Help
Entry
104055406 CDS
T08597
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104055406 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055406 (VPS54)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104055406 (VPS54)
Membrane trafficking [BR:
cuca04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
104055406 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
104055406
NCBI-ProteinID:
XP_009554817
UniProt:
A0A091FTL3
LinkDB
All DBs
Position
3:86733643..86783962
Genome browser
AA seq
976 aa
AA seq
DB search
MASSHSSSPVPQSNSSDAFFKKEMDATKHFRPVQSLPDVCPKEPTGDASNLCDSPSLVVD
QHRRTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVMPSFYLPQITKEHFALY
QQEITPREKVHERCKNTCTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLISLVFGLLKQRKINFYEIYGDEMIITAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLENIFSKFTIFLKRIKATLNTIRSVVFLVL
DKNQKNRDLEDTLQKNSAKDSMVDTEVAYLTHEGMFISDAFSEGDLPPVAADTTSQRNIS
PNSEPCSSDSVSEPECTTDSSSSKEQTSSSVTPGGVEMMIGDDMKLTDLELVRLANNIQE
LLYSASDICHDRSVKFLMARAKDGFLEKLNSNEFVALSRLMEGFILDTEQICGRKSMSLR
GALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPA
VTEERKPTEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDILTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLRALKG
LNNLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcaaacagcagtgatgctttcttt
aaaaaggaaatggatgccacaaaacattttcgacctgtgcagtctctgcctgatgtgtgt
cccaaggaacctacaggcgatgccagtaatttatgtgacagcccatctctagttgtggat
cagcacagacggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcatgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaagatgcaagaatacttgtactcct
aaagacacctttgacaggactctgttacacacccatgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacatttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgacgcagct
tcctccaaattacttcaagaaaagctgagccattatctggacattgtggaagtcaatatt
gctcatcagatttctctgcgctcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaagctgtaaaattacttagagagaaaatctcc
aaaattgataaagtaatgtgtgaaggatcgcttcgagttttaagactgtcactcaccaga
aataactgtataaaagcatacaataagctgaagttgatggctactgtacaccaaacgcag
cccacagtacagttgctgctatctacttctgagtttgttggagctttggacttaatagca
acaacacaggaggtgttacagcaagagcttcaaggcattcacagtttccggcatcttggc
tcacagctttgtgaactggaaaagctgatagataaaatgatgattgcagagttctcaacg
tatgctcgtaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttatatcactagtatttggactcctaaaacaaagaaagataaatttttatgaaata
tatggagatgaaatgattattacagcgaagaacataattaaacagtgtgtggttaataca
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcggaccagatgagg
atgatgaattttcctcagtggtttgatttactggagaatattttttctaagtttacgata
ttcctcaagagaataaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaacagagacctggaggacacgttacaaaagaactctgctaaagac
agtatggtggatacagaagtggcctacctgactcacgaaggcatgtttataagcgatgcg
ttcagcgaaggggacctcccgcctgtagcagctgacactacctctcaaagaaacatttcc
ccaaacagtgagccctgtagcagtgattcggtctccgaaccagagtgcactactgattcc
tcatccagcaaagagcaaacgtcatcttctgttactccagggggagtagagatgatgatt
ggtgatgacatgaagctgactgacctggaactggtcaggctggcaaacaatattcaagag
ttgctttatagtgcctctgatatctgccatgatcgttcagtcaagttcctcatggcaaga
gcaaaggatggcttcctagagaagctgaattccaacgagtttgttgccctttctcgcttg
atggaaggctttatcttagatactgagcagatctgcggcaggaaaagtatgtccttgcga
ggagcacttcagagtcaagccaatagatttgtgaatagattccatgaggagaggaagaca
aaactaagcctacttttggacaatgagcgctggaagcaagctgaagttcctgccgagttt
caagatcttgttgattcggtatcagatggcagaatatctcttcctgaaaaaaaaccagca
gtgactgaagaaagaaagccaaccgaatttcttattgttgaaggacaaaaatatgcaaca
gttgggacagtattgctgttaataagaataatccttgagtactgccagtgtgtggataac
attccttccatcaccactgacatacttacccgcctgtctgatttactgaagtatttcaac
tctagaagttgccagctagtacttggagctggtgcattacaagttgttggtttgaaaaca
atcaccaccaaaaacctagccctttcttcacgttgcctacagctaattgtacactacatt
cctattatcagggctcattttgaagctcgactgcagccgaagcagtttagcatgctcagg
cattttgaccacattacaaaggattatcacgaccacatagctgaaatttcagcaaagctc
gttgccataatggatagcttatttgacaaactattatccaagtatgaggtgaaagctcct
gttccttcagcatgcttcaggaatatctgcaagcaaatggcaaagatgcatgaagctata
tatgatctccttcctgaggagcaaactcagatgttgtttttaagaattaacgcaagctac
aaacttcacctgaagaggcagctggcccacctaaatgtagtcaatgatggaggacctctg
aatggactggtcacttcagatgtagctttttacactggaaacctccgagctctgaaaggc
cttaacaacctagacctaaacatggctgaaatctgggagcagaagaggtga
DBGET
integrated database retrieval system
