Cuculus canorus (common cuckoo): 104055439
Help
Entry
104055439 CDS
T08597
Symbol
PLCB1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00562
Inositol phosphate metabolism
cuca01100
Metabolic pathways
cuca04020
Calcium signaling pathway
cuca04070
Phosphatidylinositol signaling system
cuca04081
Hormone signaling
cuca04082
Neuroactive ligand signaling
cuca04261
Adrenergic signaling in cardiomyocytes
cuca04270
Vascular smooth muscle contraction
cuca04310
Wnt signaling pathway
cuca04371
Apelin signaling pathway
cuca04540
Gap junction
cuca04621
NOD-like receptor signaling pathway
cuca04912
GnRH signaling pathway
cuca04916
Melanogenesis
Module
cuca_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104055439 (PLCB1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104055439 (PLCB1)
04070 Phosphatidylinositol signaling system
104055439 (PLCB1)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104055439 (PLCB1)
04081 Hormone signaling
104055439 (PLCB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055439 (PLCB1)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
104055439 (PLCB1)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104055439 (PLCB1)
Endocytosis
Macropinocytosis
Phospholipase C
104055439 (PLCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
104055439
NCBI-ProteinID:
XP_009554856
LinkDB
All DBs
Position
3:80968226..81379443
Genome browser
AA seq
1218 aa
AA seq
DB search
MAGAQPGVHALQLKPVCVSDTLKKGIKFVKWDDDSTVVTPIILRTDPQGFFFYWTDQNKE
TELLDISLVKDARCGKHARAPKDPKLRELLDAGNLGGRLENRMITVVYGPDLVNISYLNL
VAFQEDIAKEWSDEVFSLATNLLAQNMSRDAFLEKAYTKLKLQVTPEGRIPLKNIYRLFS
ADRKRVETALEACNLPSSRNDSIPQDDFTPDVYRVFLNNLCPRPEIDHIFSEFGAKSKPY
LTVDQMMEFINLKQRDPRLNEILYPPLKQEQVQQLIEKYEPNSNLAKKGQISVDGFMRYL
SGEENGVVPPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRC
VELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPK
QQAKMAEYCRLIFGDALLMDPLEKYPLEPGVPLPSPMDLMYKILVKNKKKSHKSADGSAK
KKLSEQASNTCSDTSSMFEPSSPGAGEAEIESDDDDDYDDDCKKSSMDEGTAGSEAMATE
EMSNLVNYIQPVKFESFEVSKKRNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIY
PKGTRVDSSNYMPQVFWNAGCQMVALNFQTVDLSMQINMGMYEYNGKSGYRLKPEFMRRP
DKHFDPFTESIVDGIVANTLSVKIISGQFLSDKKVGTYVEVDMFGLPVDTRRKALKTKTS
QGNAVNPVWEEEAIVFKKVVLPSLACLRLAVYEEGGKFIGHRILPVSAIRPGYHYICLRN
ERNQPLTLPALFVYIEVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEV
KKEVDQGDAPSEANNEPRPTPAENGVNYTASLTPKPATQVVHNQPAPGSVKAPAKTEDLI
QSVLTEVEAQTIEELKQQKSFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTAKYNEIQND
YLRRRAVLEKTAKRDSKKRSETGSPDHSSTIEQELAALDSEMTQKLVELKEKQQQQLLNL
RQEQYYSEKYQKREHIKLLIQKLTDVAEECQNSQLKKLKETCEKEKKELKKKMDKKRQEK
ITEAKSKDKNQMEEEKTEMIRSYIQEVVQYIKRLEDAQSKRQEKLVEKHKEIRQQILDEK
PKLQVELDQEYQDKFKRLPLEILEFVQEAMKGKISEDGDHSSAPSSLASDSGKSNHKPLQ
SEEELEEDNPEKVFDTTF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggccggggcgcagccaggggtgcacgctctgcagctcaagcccgtctgcgtctccgac
accctgaagaaaggcatcaaattcgtcaaatgggacgatgactccactgttgtgactcca
attattctcagaacagatccacagggatttttcttctactggacagatcaaaataaggag
actgagctgctagatatcagccttgttaaagatgccagatgcggaaaacatgccagagct
cccaaggatccaaaactgcgtgaactgttggatgctgggaaccttggaggtcgactggaa
aatcgaatgataactgttgtctatggtccagacctggtcaatatatcatacttgaacttg
gtggcattccaggaggacatagcaaaggaatggtcagacgaagtgttcagtttggcaaca
aatttgttggcacagaacatgtcaagggatgcatttctggaaaaagcctacacaaaactt
aagctgcaggtgactccagaagggcgcattcctctgaagaacatataccgcttgttttcc
gctgacagaaaacgagtagagaccgcgttagaagcttgtaatcttccatcttccaggaat
gattcaatccctcaagatgacttcacaccagacgtgtacagggttttcttaaacaacctc
tgccctcggcctgagatcgaccacatcttttctgagtttggtgccaagagcaaaccatac
cttactgttgatcagatgatggaatttataaatcttaagcaacgtgatccacgattaaat
gaaattctctatccaccattaaaacaagaacaagttcaacaactgattgagaagtatgaa
cccaacagtaatctggcaaagaaaggacagatatcagtggatggatttatgcgatatctg
agtggagaagagaatggcgttgttccacctgagaaactggatttaaatgaagacatgtct
caaccactgtcacactatttcatcaattcctcacacaacacctacctcacagctggacag
ctggctggtaactcatcggtggagatgtatcggcaagtgcttttgtcaggctgccgctgc
gtggagctggactgctggaagggacgaacagctgaagaagagccggtcattacacatgga
ttcactatgacaacagaaatatctttcaaggaagtaatagaagctattgctgaatgtgca
tttaagacatcgccctttccaatcctcctttcctttgaaaatcatgtggattcccctaaa
caacaggcaaaaatggcagagtactgcagattaatatttggagacgcactgcttatggat
ccattggagaaatacccgcttgaacctggggttcctcttccaagccctatggatttaatg
tacaaaattctggtgaagaataaaaagaagtcacataagtctgcagatggaagtgcaaaa
aagaagctctcagagcaagcttccaacacatgcagtgatacgtctagtatgtttgaacct
tcctcacctggagcaggagaagcagagattgagagcgatgatgatgacgactatgatgat
gactgcaaaaagtcgtcgatggatgaaggtactgctggaagtgaggccatggccacagaa
gagatgtctaacctggtaaactacattcagcctgtgaagtttgagtcatttgaagtatca
aaaaaacgcaacaaaagttttgaaatgtcttcctttgtggaaaccaaagggcttgagcaa
ctcacaaagtctcctgtggaatttgtggaatacaacaaaatgcaactaagccgaatttac
ccaaagggaacacgtgtagattcttcaaactacatgccacaagtcttttggaatgctggc
tgccagatggttgcgcttaacttccaaactgtagatttgtctatgcaaataaacatggga
atgtacgagtacaatggcaaaagcggatacaggttaaagccagaattcatgagaagacca
gacaaacactttgatccatttactgaaagtatagtggatggaatagtagctaacaccttg
tctgtcaagataatttcaggtcagtttctttctgacaaaaaagtcggtacctatgtagaa
gtcgacatgtttggcctgcctgtggatacaagaaggaaagctttgaagacaaagacctct
caaggcaatgcagttaatcccgtctgggaagaggaagccatagtgtttaagaaggtcgtt
ttaccttccctggcgtgtttgaggctagcagtctatgaagaaggagggaaatttattggt
catcggatattaccagtctcagcaattcgaccaggctaccactacatctgtttgaggaat
gagaggaaccaacccctgacactgccagctctctttgtgtacatagaagtcaaagactat
gtacctgatacttatgcagacgtgatcgaggccttatccaatccaatcagatatgtaaac
ttgatggagcagagagctaagcaactggccgcactgactctggaagatgaagaagaggtg
aagaaagaggttgaccaaggagatgcaccatctgaagctaacaatgaacctaggccaaca
ccagcagaaaatggagtaaattatactgcctctcttaccccaaaaccagcaactcaggtt
gtccataaccaaccagcaccaggttcagttaaagcacctgcaaagacagaagatcttatt
cagagtgtccttacagaagtggaagcacagactattgaggagctaaaacagcagaagtct
tttgttaagctgcagaagaagcactacaaggaaatgaaagaccttgtaaagagacatcac
aagaaaaccactgaccttatcaaagaacacactgcaaagtataatgaaatccaaaatgac
tacctgcggcgaagagcagttttagaaaaaacagcaaaaagagacagtaagaaaaggtct
gaaacaggcagcccagatcacagttcaactattgagcaggaattggctgcgctggactct
gaaatgacccagaagctagtcgagctgaaggagaagcaacagcagcagctgctgaatctc
cgacaggagcagtattatagtgaaaagtaccagaaacgagagcacattaagctgcttatc
cagaagttgacagatgtagcagaggagtgtcagaacagccagctaaagaaactgaaagaa
acgtgtgaaaaagaaaagaaagaattgaagaaaaaaatggacaagaagaggcaggagaag
atcacggaagcaaaatccaaggataaaaatcaaatggaagaagagaagactgaaatgatt
cgttcatatatccaggaggttgtgcagtacataaagcggctagaagatgctcagagtaaa
agacaggagaaacttgtagaaaaacacaaggagattcgtcagcaaatactggatgaaaag
cctaagttgcaggtggaacttgatcaggagtatcaagacaaattcaaaagactgcctttg
gaaattctggagtttgttcaggaagccatgaaaggaaaaatcagtgaagatggagaccac
agttctgccccctcttccctggcatctgacagtggaaaatcaaatcataaacctctgcaa
agtgaagaggaattggaagaagataatccagaaaaggtgtttgatacaactttttaa
DBGET
integrated database retrieval system
