Cuculus canorus (common cuckoo): 104055458
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Entry
104055458 CDS
T08597
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104055458 (OTX1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104055458 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
GIP4
SatD
Motif
Other DBs
NCBI-GeneID:
104055458
NCBI-ProteinID:
XP_053918748
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All DBs
Position
3
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AA seq
329 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLTGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGGGAKSRPAKKKSSPARESSG
SESSGQFTPPAAASSSASSSSSSSASSAPTGAPASLSTPASSIWSPASISPGAAPAGVSV
PDPLPPAASCMQRAGAAPASYPVSYGQGGGYGQGYPAPPSSSYFGGVDCGSYLAPMHSHH
HPHQLSPMGPSSVPGHHHHHPLSQSSGHHHHHHHHHHQGYGGTALPFNSSDCLDYKEPAA
AAAASWKLNFNSPDCLDYKDQASWRFQVL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttaccttaaacagcccccttacggcatgaacgggctggggctgacgggcccg
gccatggacctgcttcacccctccgtggggtacccggccacccctcggaagcagcggcgg
gagcgcaccaccttcacccgctcgcagctggacgtgctggaggctctcttcgccaagacc
cgctaccccgacatcttcatgcgggaggaagtcgccctcaagatcaaccttcccgaatcc
cgagtccaggtctggttcaagaaccgtcgtgccaagtgccggcagcagcagcagagcggc
ggcggggccaagagccgcccggccaaaaagaaatcctcgcccgcccgcgagagctcgggc
tcggagagcagcgggcagttcacgccgccggcagccgcctccagctcggcctcctcctcc
tcctccagctctgcctcctcggccccgacgggcgccccggcctccctcagcactccggcc
tcgtccatctggagccccgcgtccatctcccccggcgcggccccggcgggggtgtcggtg
cccgacccgctgccgcccgccgcctcctgcatgcagcgcgcgggcgccgcgcccgcctcc
taccccgtgtcctacggccagggcggcggctacggccagggctaccccgcgccgccctcc
tcctcctacttcggcggcgtggattgcggctcctacctggcgcccatgcactcccaccac
cacccccaccagctcagccccatgggcccctcctcggtgcccggccaccaccaccaccac
ccgctgagccagagctcgggccaccatcaccaccaccatcaccaccaccaccagggctac
ggcggcaccgcgctgcccttcaactcctccgactgcctggactacaaggagcccgccgcc
gccgctgccgcctcctggaagctcaacttcaactcccccgactgcctcgactacaaggac
caggcgtcctggcgcttccaggtcttgtga
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