Cuculus canorus (common cuckoo): 104055470
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Entry
104055470 CDS
T08597
Symbol
GRIN2B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04020
Calcium signaling pathway
cuca04080
Neuroactive ligand-receptor interaction
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104055470 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104055470 (GRIN2B)
04082 Neuroactive ligand signaling
104055470 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104055470 (GRIN2B)
Ion channels [BR:
cuca04040
]
Ligand-gated channels
Glutamate (ionotropic)
104055470 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
104055470
NCBI-ProteinID:
XP_009554888
LinkDB
All DBs
Position
1:156820635..157036019
Genome browser
AA seq
1503 aa
AA seq
DB search
MRPRVECYSPKFWLVLAVLATTGSGAHAQKSHPSIGIAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIEHSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VENVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEERQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSTSSIDGLYDCDNPPFNAQSRSI
GKKPLDLGLPPAKHSQLGDLYGKFSFKSDRYGGSGAHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRAKENSPHWEHVDLTDIYKERGDEFKRDAGGGGSGSCTNRAHHKHGSGEFGGSNEHKH
GGVSGVPAPWEKNLTNLDWEDRPGANFCRSCPSKLHNYTPSVVGQNSTRQACIRCEACKK
AGNLYDISEDNSLQELDQPPAPVPVATSATSSSKYPQSPSNSASKVQKKNRNKLRRQHSY
DTFVDLQKDDSALAPRSVSLKDKGRFLEGSPYAHMFEMPASETTFANNKSSVPATSYHHH
NNPGSSGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPMVAGGPKARPDFR
AIVTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIE
SDV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagagtggagtgctattctccaaagttttggctggtgctggcagtcctcgca
acaacagggagcggggcccatgcccagaaaagccacccgagcattggcattgcggtcatc
ctggtggggacctcagacgaagtggccatcaaagatgcccacgagaaagatgacttccac
cacctctcagtggtgcctcgggtggagctggtggccatgaatgagacagatcccaagagc
atcatcactcgcatctgtgacctcatgtcagaccggaagattcagggggtggtgtttgct
gatgacacagaccaggaagccattgcccagatcctagacttcatctctgcccagaccctc
actcccatcctgggcatccacggaggctcctctatgatcatggcagataaggatgagtca
tccatgttcttccagtttggcccatcaatagaacaacaagcctctgtcatgctcaacata
atggaagaatatgattggtacatcttctccattgtcactacttacttccctggttaccag
gactttgtgaacaagatccgcagtaccattgagcacagttttgtgggttgggaactggag
gaggtcctcctgttggacatgtccctggatgatggggactcaaagatccagaaccagctc
aagaaactccaaagccctgttatcctcctctactgcacaaaggaagaggccacctacatt
tttgaggtggccaactctgtgggtctgacaggctatggttacacgtggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatctgagttccccactgggctcatctctgtc
tcatatgatgaatgggactacggtcttcctgccagagtgagggatggaatagccataatc
accacggctgcttctgatatgctgtctgaacacagcttcatccctgagcccaagagcagc
tgttacaacacccaggagaaaaggatttaccagtccaacatgctcaacaggtacctgatc
aatgtcaccttcgaaggcaggaatttgtcattcagtgaagacggataccagatgcatccc
aagctggtcatcatccttctgaccaaggagaggaagtgggagagggtggggaaatggaag
gaaaaaaagttgcagatgaagtattatgtgtggccccgctttgagctataccctgactct
gaggaacgtgaggatgatcacctgagtatcgtgaccttggaagaggcaccattcgtcatt
gtggaaaatgtggaccccctaagtggcacctgcatgaggaacacggtcccttgccaaaaa
cgcatagtgactgagaacaaaaccgatgaggagccagattacatgaagaaatgttgcaag
gggttctgcattgacatcctgaagaaaatctcaaagtctgtaaagttcacctatgacctg
tatttggtgactaacggcaagcatgggaaaaagatcaatggaacatggaatggaatgatt
ggagaggtcgtcaccaaacgggcctatatggctgtgggatccctcaccattaatgaggag
cgctcagaagtggtggatttctctgtgcccttcattgagacgggaatcagtgtcatggtg
tcacgtagcaacggaactgtctcaccttctgccttcctagagcctttcagtgctgatgta
tgggtgatgatgtttgtgatgctgcttatcatctctgcagtggccgtctttgtctttgag
tacttcagccctgtaggctataatcggtgccttgctgatggcagagagcctggaggtccc
tctttcaccattggcaaagctatctggttgctgtgggggctggtgttcaacaactctgtg
ccagtgcagaatcccaagggtaccactagtaagatcatggtgtcggtgtgggccttcttc
gctgtcatctttctggccagctacactgccaacctggctgccttcatgatccaagaggaa
tacgtggaccaggtgtctggcttgagtgacaaaaagttccagaaaccaaatgacttttca
ccccctttccgctttgggacagttcccaatggcagcacagaaaggaacattcgcaacaac
taccctgaaatgcacagctacatggtgaagttcaatcagagaggggtagatgatgcactg
ttctcactgaagactgggaagttggatgctttcatttatgatgcagcagtgctaaactac
atggctggcagagatgaaggctgcaagctggtgacaattgggagtgggaaagtgtttgcc
tccaccggctatggcattgccatccaaaaggactcaggctggaaacgtcaagtggacctt
gccattctacagctttttggagatggggagatggaggagctggaagcactgtggctcact
ggcatttgtcataatgagaagaatgaggttatgagcagccagctggatatagataacatg
gcaggtgtcttctacatgctgggagcagccatggcactcagtctcatcaccttcatctgt
gagcatctcttctactggcaattccgccactgcttcatgggcgtctgctctggcaagcct
ggtgtggtcttctccatcagcaggggtatctacagctgcatccatggcgtagccatcgag
gaacgccagtcagcaatgaactcccctacagcaactatgaacaacacccattccaacatc
ctccgcctgcttcggacagccaagaacatggccaacctatcaggggtcaatggctcacca
cagagtgccctggactttatccgccgcgagtcatctgtctatgatatctctgagcaccgc
cgcagcttcacccactcagactgcaagtcctacaacaaccccccctgtgaggagaacctc
tttagtgactatattagtgaggtggaaaggacctttggcaacctccagctgaaggacagc
aatgtatatcaggaccactaccaccaccaccaccgtccccacagtatcggcagcaccagt
tccattgatgggctctatgattgtgacaacccgcctttcaatgcgcagtcacggtctatt
gggaagaagcccttggacctggggttaccccctgccaagcacagccagctgggcgacctt
tatggcaagttctccttcaaaagtgaccgctatgggggcagtggggcccatgatgacctg
atccgctcggatgtctctgacatttccactcacacagtcacctacggcaacatcgagggc
aatgcagccaagcgacggaagcagcagtacaaagacagcctgaagaagcgcccggcctct
gccaagtcccggcgggagtttgatgagatagagctggcctatcgccggcgcccaccccgc
tcacctgaccacaagcgctacttcagggacaaggaagggctacgggacttctacctggac
cagtttcgtgccaaggagaactcgccgcactgggaacatgtggacctgacggatatctat
aaagagcggggagatgagtttaagcgcgacgcgggaggaggagggagtggatcctgcacc
aacagggcccaccacaagcatggctcgggtgagtttggtggaagcaatgagcacaagcat
ggtggtgtgagtggggtcccggcgccctgggagaagaacctgaccaacctagactgggag
gaccggcctggggctaatttctgccgcagttgcccttctaagctgcacaactacacacca
tcggtggtggggcagaactccacccgtcaggcctgcatccgctgcgaggcctgcaagaaa
gcaggcaacctgtacgacatcagtgaggacaactcactccaagagctggatcagccacct
gcccctgtgcccgtggccaccagtgccacctcctcctccaaatatcctcagagcccttcc
aactctgcctccaaggtgcagaagaagaaccgcaacaagctccgccggcagcactcgtat
gacaccttcgtggatctgcagaaggatgactcggccctggccccccgcagtgtcagcctc
aaggacaagggccgctttttggaagggagtccctacgcccacatgtttgagatgccagcc
agtgagaccacgtttgccaacaacaagtcctcagtgcccgccaccagctaccaccaccac
aacaaccccggcagcagtgggggctacatgctcagcaagtcgctctaccccgaccgggtc
acccaaaaccctttcatccccacttttggggatgaccagtgcttgctccacggcagcaaa
tcttatttcttcaggcagcctatggtggcaggagggcccaaagccaggccagacttccga
gccatcgtcaccaccaacaaaccggtggtctcagcccttcatggggctgtgccagcccgt
ttccagaaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaac
cccagggctttcaatggctccagcaacgggcatgtttatgagaaactctccagtattgag
tctgacgtttga
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integrated database retrieval system
