Cuculus canorus (common cuckoo): 104055531
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Entry
104055531 CDS
T08597
Symbol
NFX1
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104055531 (NFX1)
04121 Ubiquitin system [BR:
cuca04121
]
104055531 (NFX1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104055531 (NFX1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
104055531 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
104055531
NCBI-ProteinID:
XP_053916349
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All DBs
Position
2:complement(100732425..100804790)
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AA seq
1162 aa
AA seq
DB search
MAGAPLAAEPRRDTLPEEECASCQRMTNERELQEKTPGTGALNFNSDAADSIPGEGKPTD
INWVNKDRKDSNSNQNRGNLPFLSLSSERGTDNESSSTKHPENRYGNSEDLHQYFGTSKS
LKNRSLQNQRWNRSRNDSTYTRSKIRQSTVDTSASPGMSHVAVVPGRRAPPRGCNDFLSS
ESDREVPDADSRGAKPKKTHLMHASGRGVREKGKQIHDREKRASSKQKVDQLENVPSLDL
TQSDSSESSVGKAFCDAPVGSADEQKGYNYVNKRYPRKPVWNKPPAEKEYQKKHDSHHGK
NTKVVKKSSLAYTPKDKSEKKRELSVHKNDEKLPSEIRHQLSDSVRHNGRKFLLKGDQAP
ALHFSWTQYWKKQSDVPKNKETHTGSLIEQLATEKYECMVCCEVVRIVAPVWSCQNCYHV
FHLNCIKKWARSPASQAEDGNSGWRCPACQNASMQVPKTYTCFCGKVHNPEWNRTDIPHS
CGELCGKKRQCLDCPHLCNILCHPGPCPSCPAFVTKTCECGQTSHSVRCGQSTKFHCSNV
CGNTLNCGKHSCTQVCHAGKCSPCQLTVQQVCYCGNNFKEVLCGTKEEFSDGFGNFSCQN
ICGKKLNCGRHNCTQVCHPQPCQLCPRLPQVVYRCPCGQTPLSKLLELGCVERKICTDPI
PSCGKTCGKPLSCGSYEFIHTCESLCHEGDCRPCSRTSNIYCRCGFKKKEVPCALLRNKA
AITFMCDKRCNKKRSCGRHKCNEICCVDTEHKCSLVCGRKLNCGLHRCEEPCHRGSCQTC
WQTSFDELTCYCGESVIYPPVPCGTQPPECKKSCTRPHDCDHPVYHSCHSEEKCPPCTYL
TQKWCMGKHELRSNIPCHLTDISCGLRCNQMLKCGMHKCKRICHKGECLIDEECKQPCTI
PRLYCNHPCMAPCHPSSPCPTTSCCAKVDLQCECGRRKESMICSEASNTYQRIAAISIAT
KLTDLQLGDSVEISRLITKKEMKQARLQCDEECLALQRNRHLAEALEIDDNSDPFNIRSS
GPKYSDLLKEDARKDLKFVSDIEKEMRMLVEAVNKGKHTKKSHCYPPMNRDHRRIIHELA
QVYGIESVSYDSEPKRNVVITAVKGKSICPSNTLTSVLDKEMQSRPPPPIPHYKQTDKSS
GNSGLSKPLKEEPVIDYFDVQD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgcccctcgccgcagagcctcgaagggacaccctgcctgaggaagagtgt
gcgagctgccagcggatgacgaatgaacgggaactccaggaaaagacacctggaacgggc
gcattgaatttcaattctgatgctgccgattctattccaggagaaggaaaacctacagat
atcaactgggtaaataaagataggaaggactctaacagtaatcagaatagaggcaattta
ccgtttcttagtctgtcttctgaaagaggtacagataatgaaagctcttccacaaagcat
ccagaaaatcgctatgggaattctgaagacttacaccaatattttggtaccagtaaaagt
ctgaagaatcgcagcttgcaaaaccagaggtggaacagatccagaaacgatagcacatac
acgagaagtaagataaggcagagcactgtggatacttctgcaagtccaggaatgtcccat
gttgcagtagtacctgggagaagagctcctcctagaggatgcaatgattttctctcttca
gagagcgacagggaggtacctgatgcagatagcagaggagcaaagccgaagaaaacacat
ctgatgcatgcatctggaagaggtgtcagggagaagggaaagcaaatacatgaccgggaa
aagagagcgagctctaaacagaaagtggatcagctagaaaatgttccatctttggatttg
actcagtctgactcttcagaatcatctgttggaaaggctttctgtgatgcacctgttggt
agtgcagatgagcagaagggctacaattatgtaaataaaagatatccccggaagcctgta
tggaataaacccccagcagaaaaggagtatcagaaaaaacatgattctcaccatggtaaa
aatacaaaagtagttaagaagtcttctcttgcatatactccaaaagataaaagtgagaag
aagagagaactctctgttcacaaaaatgatgaaaaactgcctagtgagatcaggcatcaa
ctgtctgattctgtcagacacaatggaagaaagttcctcttaaagggggatcaggcacct
gcacttcatttcagctggacccagtactggaaaaagcaaagtgatgtaccaaaaaacaaa
gaaactcacacagggtcattgattgaacagctggccacagagaagtacgagtgtatggtc
tgctgtgaggtggtccgaatagtagctccagtctggagctgtcagaattgttaccatgta
ttccacttgaattgcattaagaagtgggcacgatcacctgcttcacaagctgaagatggt
aacagtggttggagatgtccagcttgtcagaatgcatctatgcaagttcctaaaacttac
acctgtttctgtggtaaggtgcacaatcctgaatggaatagaactgacatcccacatagc
tgtggggaactttgtggaaagaagagacagtgtttggactgtccccatctttgtaacatc
ctgtgccatccaggaccctgcccatcatgcccagcctttgtgacaaaaacatgtgaatgt
ggacaaacaagtcattcagttcgctgtggccagtcaacaaaatttcactgttctaatgta
tgtggaaatactttaaactgtggtaagcacagctgtactcaagtgtgccatgcgggaaaa
tgttcaccttgccagttaacagtgcagcaagtgtgctactgtggaaacaactttaaagaa
gtattgtgtgggacaaaggaagagttctctgatggatttgggaatttttcatgtcagaac
atatgtggcaaaaaattaaattgtgggaggcacaactgtacgcaagtatgccatcctcag
ccttgtcagctctgtccacggcttccacaagtagtatatcgctgtccttgtggtcagact
cctctcagcaagttactggagttaggatgtgttgaacgtaaaatatgcacagacccgatc
ccctcgtgtggaaaaacatgtggcaaacctctttcttgtggtagctatgagttcattcat
acgtgtgaaagcctttgccatgaaggcgactgcagaccgtgttctcgtacatcaaatatt
tattgtaggtgtggcttcaaaaaaaaggaagtaccatgtgctctcctcagaaataaagct
gctattacattcatgtgtgacaagcgatgcaacaagaaaagatcatgtggacgacacaag
tgtaatgaaatttgctgcgtggacacagaacataagtgttccttggtttgtggtcgtaaa
ctcaactgtgggcttcatagatgtgaagaaccctgtcatcggggcagctgtcaaacatgc
tggcaaacaagttttgatgaattaacttgttattgtggtgagtccgtgatttacccgcct
gtcccctgtggtactcagccgccagagtgtaaaaaatcatgcaccaggccacatgactgt
gatcatccggtgtatcattcgtgtcatagtgaggagaaatgtccaccctgtacctatctc
actcagaaatggtgtatgggaaagcatgaactgcgaagcaatattccttgtcatctcact
gacatttcctgtggacttcgctgcaatcaaatgttaaaatgtggaatgcataaatgtaaa
agaatctgtcataaaggagaatgtcttatagatgaagaatgtaaacaaccatgtactatt
ccaaggctatattgtaatcacccctgtatggctccatgtcacccttcctcaccctgtccg
acaacgtcctgctgtgcaaaggttgatcttcagtgtgagtgcggacgaagaaaggagagt
atgatttgctctgaagcatctaatacatatcaaagaatagctgctatatctatagccact
aagttaacagacctacagcttggagattcagtggaaatcagtaggcttattacaaaaaaa
gaaatgaagcaggccagattgcagtgtgatgaagaatgcttagctcttcagaggaacagg
catcttgctgaggctcttgaaatagatgataattctgatccttttaacatccgttcttct
ggaccgaagtacagtgaccttctaaaagaagatgcaaggaaggatttaaaatttgtcagt
gacatcgagaaggaaatgagaatgcttgtggaagctgtgaataagggcaagcataccaag
aaaagccattgttacccgccaatgaacagagatcaccgcagaatcatccatgaattagct
caggtttatggcattgaaagcgtgagctatgacagtgaaccaaagcgtaatgttgttatc
actgcagtgaaagggaaatccatttgtccgagcaacaccttaacttctgtcctagataaa
gaaatgcagagcaggcctccgcctcctattcctcattacaaacaaacagataagagtagt
ggaaacagtggtttatccaaaccattgaaagaagagccggtaattgactactttgatgtc
caggactaa
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