Cuculus canorus (common cuckoo): 104055539
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Entry
104055539 CDS
T08597
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04010
MAPK signaling pathway
cuca04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104055539 (CACNA1I)
04020 Calcium signaling pathway
104055539 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104055539 (CACNA1I)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104055539 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
104055539
NCBI-ProteinID:
XP_053942694
LinkDB
All DBs
Position
1:154550918..154727475
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AA seq
2191 aa
AA seq
DB search
MAEYVSQPSSTWPPGPQPPHASTICPLEPVDLGVSEQQTPPEQPPSSPELGEDEDVTSPT
DPDVPYPDLAPVVFFCLKQTTSPRNWCIKMVCNPWFECVSMMVILLNCVTLGMYQPCEDM
DCLSDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEY
SLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGI
IGVQLWAGLLRNRCFMEENFTIQGDIVLPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPP
LKERGHECCLDKDDYYYYNSVRQEFNISGMCVNWNQYYNVCRTGNANPHKGAINFDNIGY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYICHIVRKAKRRTLGLYNSIQSRRQ
GHVEPSNAKRGMSRKDQRHYRLCQQHNSLDCPSQGLVQPIAVTTTSDPTNCPRCHKAGHE
ASRRLSVLDSADSDQEDRGASEEEGEGSREDQGASTGGKEEVEEGGRLKLCSEMWREVRA
KLRGIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNVVFTSMFALEMILKL
AAFGLFDYLRNPYNIFDSIIVIISIWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQ
LVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAI
VTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDA
NRSYSDEDQSSSNMEDLDQCQEVQEGSDPKLCAIPVTPNGHLDPSLPSSNPSVAAGGVTN
SSRNSLQPDQIRVAVGSRKSSVMSLGRMTYDQRSLSSSRSSHYGAWGRSGAWSSRRSSWN
TLARGHSLKHKPPSAEHESLLSGERHRAADGEPDGAGRAFHHRRTLSLDNKGSCDLLELA
SVPSSHRVTRKLGAATGVSEHQDCNGKMPSIAKEIFPKMDNRKERGEDDEEIDYSLCFRI
RKMMEVYKPDWCELREDWSIYLFSPQNRFRLLCQTIIAHKLFDYVVLAFIFLNCITIALE
RPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQAYLRSSWNILDGFLVFV
SLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIV
LICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCMAANYKWVHHKYNFDNLGQAL
MSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVV
VENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPLRLLIHSVCTSHYLD
IFITFIICLNVVTMSLEHYNQPVSLETALKYCNYLFTTVFVLEAVLKLVAFGLRRFFKDR
WNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLD
TVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAFLT
LFQVSTGDNWNGIMKDTLRDCSHDDRSCLSNLQFISPLYFVSFVLTAQFVLINVVVAVLM
KHLDDSNKEAQEDAEMDAEIELEIAHGLCSRKSGSSNSRQGKGAGTGGGSGRTDPEGRLC
TRCYSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFHHYSSPAMCEKCNHDKQEVQL
AEMEALSLNSDKSSSILLGDESDNRSTSQLSPKEMKQDGQESADSNGEGDLGECLLPMSN
VDSSTNPNSYLCEMEKTPFNSVQSWLQHESTKAPPSPFSPGASCPLLPVPAEFFHPAISA
TQTGPEKVSCPRNLPKISLQGSWASLRSPSVNCSLLQQAPESDTSLDSRSSSSAGSLQTT
LEDSLNLSDSPQCTLDLPVALCPMPASDSQRPLGVPLSPASRRRSLRGRGLFSLQSIRRH
QRSHSSGGSTSPGCTHHDSMDPSDEEGVGSSLRGGGNNSEPSETLSSLSLTSLFSPPPPG
LTLVKKCSSTSSLHASPSPRRPTAHHAKPFYTVDPRGFLSMPSWVTDFCKDTPSPREGEE
PDGPGRLGTGDCGSPLPSELELGDGVSKRNR
NT seq
6576 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacgtgtcccagccttcttccacctggcctccaggcccacagcctcctcat
gcctctacaatctgcccattggagcctgtggatctgggggtctcggagcagcaaacacca
ccagagcagcctccatcttctccggagctgggtgaggatgaggacgtcacctccccgacg
gaccctgatgttccctaccccgacttggccccagttgtcttcttctgcttgaagcagacc
accagcccgcgtaactggtgcatcaaaatggtgtgcaacccttggtttgagtgtgtcagc
atgatggtgattttgttaaactgcgttaccctggggatgtaccaaccctgtgaggatatg
gactgcctttctgacaggtgtaaaatcttgcaggtatttgatgatttcatcttcatcttc
tttgccatggaaatggtcttaaagatggtggccctgggaatctttggcaagaagtgttac
cttggagacacctggaatcgcctggatttcttcattgttatggctgggatggtcgagtac
tccctggatctccaaaacattaacctgtctgcaatccgtaccgttcgtgtcttgagacca
ctgaaagctatcaaccgtgtgcctagcatgcgtatccttgtgaacttgctcctggacacc
ttgcctatgctggggaacgtccttcttctctgcttctttgtcttcttcatcttcggcatc
atcggggtgcagctgtgggctgggctgctccgcaaccgctgcttcatggaggagaacttc
acaatacaaggtgacattgtcctgcccccttattaccagcctgaggaagatgatgagatg
ccctttatctgctcactgtcaggtgacaatggaattatgggctgtcacgagatacctcca
ctgaaggagcggggccatgaatgttgtttggacaaggatgattattattactacaactca
gtcaggcaggagttcaacatcagtggcatgtgtgtcaactggaaccagtactataacgtg
tgtcgtacaggcaatgctaacccacacaagggtgctatcaactttgacaacattgggtat
gcctggattgtgatatttcaggtgatcacgttggaagggtgggtggagatcatgtactat
gtgatggatgcccattccttctacaatttcatctactttatcttgctgataattgtgggc
tccttcttcatgattaacctgtgcctagtggtcattgctacacagttctcagagactaag
cagcgggaacaccagctgatgcaggagcagcgggcccggtacctctcctccagcactgtc
gccagctacatggagccgggagactgctacgaggagatcttccaatacatctgccacatt
gtgcgcaaagccaagcgccgcacccttgggctgtacaacagcatccaaagccggcgccag
ggccacgtggagccgagcaatgccaagcgaggcatgagcaggaaagaccagaggcactac
aggctttgccagcagcacaactctcttgactgcccttctcagggcttggtccagcccatt
gctgtgacaacaacctctgatcccaccaactgcccccgatgccacaaggcagggcatgaa
gcatccagaaggctctcagtcctggacagcgctgattcagatcaggaagatagaggagcc
agtgaagaggagggagagggcagcagagaggaccagggtgcctcaacaggggggaaggag
gaggtggaagaaggtggacggctgaagctttgcagtgaaatgtggcgagaagtgagggct
aagcttcgagggattgtggacagcaagtacttcaaccgtgggatcatgatcgcaattcta
gtgaacacaatcagcatgggcattgagcaccatgagcagccagaagaattgaccaacatc
ttggagatcagcaacgttgtctttacaagcatgtttgccctggagatgatcctgaaactt
gctgcttttggactctttgattacctccgcaacccctacaacatctttgacagtatcatc
gtcatcatcagcatctgggagattattggccaagcagacggtggcctctctgtgctgagg
actttccgtctcctgcgggtgttgaagctggtgcgtttcatgcccgcactgcgccgccag
cttgtggtgctgatgaagactatggacaacgttgccaccttctgcatgctcctcatgctc
ttcatctttatattcagcatcctgggaatgcacatctttggttgcaagttcagcctcagg
acagacacaggagatacagttcctgaccggaagaattttgactccctgctgtgggccatc
gtcactgttttccagatcctaacccaggaagactggaatgttgtgctctataatggcatg
gcctccacctcgccatgggcatccctctactttgtggctctcatgacatttggcaattat
gtcctcttcaatctgctagtggctattcttgtggagggcttccaggctgagggtgatgcc
aaccggtcatactcagatgaagatcagagctcgtcaaacatggaagatttagatcagtgc
caagaggtccaggaaggctcagatcccaagctctgtgcaattcctgtgacacctaatgga
cacttggacccatccttgccctcttccaacccatcagtggctgctgggggtgtcaccaac
tcttcacgcaattccctgcagcctgaccagatccgtgttgctgttggctcccggaagagc
agtgtgatgtccctggggagaatgacctatgaccagcggtccttgtccagctcccgcagt
tcccactacggtgcctggggccgcagcggggcctggagcagccgtcgctccagctggaac
accctggctcgagggcacagcctgaagcataaacctccctctgccgagcacgaatccctc
ctgtctggagagaggcacagagcagcagatggggagccagatggggcaggaagggcgttt
catcaccgccggacactctccctggacaacaaaggctcctgtgacctgctggagttggcc
tcggtcccatccagccacagagtgactcgtaagctgggagcagccactggggtcagtgag
catcaggactgcaatggcaaaatgcccagcattgccaaggagatcttcccaaagatggac
aaccgcaaggaacggggagaggatgatgaagagatagattacagcctgtgctttcgcatc
cggaagatgatggaagtctataaaccagactggtgtgagttacgggaagactggtccata
tatctcttctctccacaaaacaggtttcgccttctctgccaaaccatcattgctcacaag
ctctttgactacgttgtgctggccttcatcttcctaaattgcatcaccattgccctggag
agaccacagattgaacacagaagcacggagaggatctttctcactgtgtccaactacatt
ttcacagcaatttttgtagctgagatgacactgaaggtggtctctctaggcctgtatttt
ggggatcaggcttatctccgcagcagctggaacatcttggatggcttcttggtcttcgtg
tctctcattgacattgtggtgtctgtggcctctgctggtggtgccaaaatcctaggggtg
ctgcgggtcctccggctgctgcgcaccttacgtccactccgggtaatcagccgagcccct
ggcctgaagctagtggtggagacactcatttcttccctcaagcccataggaaacattgtc
ctcatctgctgcgctttcttcatcatcttcggcatcctgggtgtgcagctcttcaagggc
aagttctaccactgcctgggagtcgacatcaggaacatcaccaaccggtctgattgcatg
gctgccaactacaagtgggttcaccacaagtataacttcgacaacctgggacaggctctg
atgtccctgtttgttctggcttccaaggatggctgggttaatatcatgtataatggacta
gatgctgtggctgttgaccagcagccagtgaccaacaacaacccctggatgctcctttac
ttcatctccttccttctcatcgtcagcttctttgtgctcaacatgttcgtaggggtggtg
gtggagaacttccataagtgccggcagcaccaggaggctgaggaggcgcgccggcgggaa
gagaaacgcttgcgccgcctggaaaaaaagcgaaggaaggcacagcgtttgccgtactat
gctacctactgccccttacgcctccttattcattcggtctgcaccagccactatctggac
atcttcatcactttcatcatctgcctcaacgtggtcactatgtccctggagcactacaac
caacctgtgtccttggagaccgccctcaagtactgcaactacttgttcaccactgtcttt
gtgttggaggcagtgctcaagctggtggcatttggtctgcgccgattcttcaaagacagg
tggaaccaactagacctggccattgtactgctgtctgtcatgggcatcacgctggaagag
attgaaatcaatgctgctctcccaattaaccccactatcatccggatcatgagggtgctg
cgcattgcccgggttctgaagctactgaagatggccacaggaatgcgagcactgctggat
accgttgttcaagccctgccacaggtgggaaaccttggactgcttttcatgctcctcttt
ttcatctacgctgctctaggagtggagctgtttggaaaactggtatgcaacgatgagaac
ccctgtgagggcatgagccgccatgctacctttgagaactttgggatggccttcctcaca
ctcttccaggtgtccacaggtgacaactggaatgggatcatgaaggataccttgcgtgac
tgcagccacgatgaccggagctgcctcagcaacttgcagttcatctcgccactgtacttt
gtcagctttgtgctcacagctcagtttgtcctcatcaatgtggtggtagctgtgctcatg
aaacatctcgacgacagcaacaaggaggcccaggaagatgcagagatggatgctgagatt
gagctggaaattgcacatgggctatgctcccgcaagtcaggctcctcaaattcaagacag
ggaaaaggagcaggaacaggaggaggcagtgggagaacagatcctgaaggacgtctgtgc
acgagatgttactccccagcacaggagaacttatggctggacagtgtctctttaattatt
aaggactccttcgacggggagttaatgatcatcgataacctatcgggctccgtcttccat
cattactcctcgccggccatgtgcgagaagtgtaaccatgacaagcaagaggtccagctg
gctgaaatggaagccttatccctcaactcagacaagtcctcttccatccttctaggagat
gagtcagacaatcgcagcacttctcagctgagtcctaaggagatgaagcaggatggccag
gagagtgctgactccaatggggaaggtgatctgggtgaatgcctgctcccgatgtccaat
gtggatagctctacaaacccaaacagttatctgtgtgaaatggagaaaactccttttaac
tcagtgcagtcttggctacagcatgaaagtaccaaagcccctcccagccccttctcccca
ggtgcgtcttgccctctgttacctgtaccagcagaatttttccacccagccatctctgcc
acccagacaggccctgagaaagtctcgtgtccacgcaaccttcctaagatctctctgcaa
ggctcatgggcatcactgagatctccaagtgtgaactgttcacttcttcaacaggcccct
gagagcgatacctcgctggacagccggagcagcagctcagcaggcagcctgcagaccacg
ctggaggacagcctcaacctcagtgactctccccagtgcaccctagacctcccagtggct
ctgtgccccatgccagcttctgacagccaaagacccctgggagtccccctctccccagcc
tcccgccgccggagtctgaggggccgggggctcttcagcctgcaaagcatccgtcggcac
cagcgcagccacagcagcggtgggagcacaagccccggctgcacccaccatgactccatg
gacccctcggatgaggagggggtgggtagcagcctacgagggggtggcaacaacagtgag
ccctcggagaccctcagcagcctctcgctgacctccctcttctcacccccaccaccgggg
ctgacactggtgaagaagtgcagcagcacaagcagcctccacgccagcccttcgccccgc
cgccccactgcccaccacgccaagcccttctacactgttgacccccggggcttcctctcg
atgccctcctgggtgacggacttctgcaaggacaccccctcacccagggaaggagaggag
ccggatggtcctggcagactggggacaggggactgtggctccccactcccatccgagctg
gagctgggcgatggagtcagcaagaggaacagatga
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