Cuculus canorus (common cuckoo): 104055647 Help Entry 104055647         CDS       T08597                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism cuca  Cuculus canorus (common cuckoo) Pathway cuca04510   Focal adhesion cuca04512   ECM-receptor interaction cuca04518   Integrin signaling Brite KEGG Orthology (KO) [BR:cuca00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104055647 (COL2A1)    04518 Integrin signaling     104055647 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104055647 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cuca00536]     104055647 (COL2A1) Glycosaminoglycan binding proteins [BR:cuca00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104055647 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  104055647 NCBI-ProteinID:  XP_053907471 LinkDB All DBs Position 29:complement(2111627..2132907) Genome browser AA seq 1487 aa AA seqDB search MPGRRPPRPEAAFGLLLLLLLGAAAQDRDLPAAGSCLQDGQIYSDKDVWKPEPCRICVCD TGTVLCDEIICEDLRDCPSPEIPFGECCPICPTDQPSGKPGPKGQKGEPGDIKDVVGPRG PPGPQGPAGEQGQRGDRGEKGEKGVPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMG PRGPPGPPGKPGDDGETGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG EAGAPGAKGEAGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVG PAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG PPGPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAG PKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGEMGAAGPPGPAGPAGERGEQGAPG PSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG LPGTPGTDGPKGATGPAGPTGAQGPPGLQGMPGERGAAGIAGPKGDRGDIGEKGPEGAPG KDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPG ADGQPGAKGEQGEPGQKGDAGSPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG AAGRVGPPGPNGNPGPPGPPGSAGKEGPKGSRGDAGPPGRAGDPGLQGPAGPPGEKGEPG EDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPG PVGPPGLTGPAGEPGREGNPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVG PTGKQGDRGEAGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG LPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAG PPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAAGGLRQHDVEVDATLK ALNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETG ETCVYPTPRSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRL LSTEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTK HTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgcccggccgccgcccgccccggcccgaggcagccttcggcctcctcctcctcctcctc ctcggagccgccgcgcaggacagagacctccccgccgcgggcagctgcctgcaggacggg cagatctatagcgataaggacgtctggaagccggagccgtgccgtatctgcgtgtgcgac acgggaaccgtcctctgcgacgagatcatctgcgaggacctccgcgattgtcccagcccc gaaatccccttcggagaatgctgccccatttgccccactgaccaacccagcgggaagcct ggtcccaagggacagaagggcgaacccggtgacatcaaagatgttgtaggaccccgaggg cctccgggaccacagggccctgcaggcgagcagggacaacgaggggaccgtggggagaag ggggagaagggtgttcctggcccccgcggcagggatggagaacccggcacccctggaaat cctggcccccccggtcctcctggccctcctggccccccaggtctcggtgggaacttcgcg gcgcagatggccggcggcttcgacgagaaggctggaggcgcgcagatgggcgtcatgcag ggccccatgggccccatgggaccccgtggcccccccggaccttcaggtgctcctggtccc caaggcttccaaggcaaccccggtgaacctggcgagcccggcgctgctggtccgatgggt cctcggggaccaccaggacctcctgggaaacctggtgacgacggcgagacaggaaaaccc ggcaaagctggtgaacgcggcccccccggcccccagggtgctcgtggcttccccggaaca cccggtctccctggagtgaaagggcaccgcggctacccaggcttggatggtgccaaggga gaggcaggagctcctggagccaagggcgaagctggctcccccggcgagaacggctccccc ggccccatgggtccccgcgggcttcctggcgagcgaggacgtcccggtccctccggcgct gcgggcgctcgaggcaacgatgggctccccggccccgctggaccccccggacctgttggc ccagctggagcccccggcttccccggcgctcccggctcaaagggtgaagctggtcccacc ggcgcacgaggtcccgagggtgcccagggtccccgcggtgaatccggcacccccggctct cctggccctgctggcgccccgggtaacccaggaactgatggcattcccggcgcaaagggc tcggcgggtgcccccggcatcgccggcgctccaggcttccctggcccccgcggcccccct ggaccccaaggtgccactgggccgctgggacccaagggacagacgggagaaccgggcatc gccggcttcaaaggcgaacagggaccgaagggcgagacgggacccgcaggacctcaaggt ccccccggaccggctggtgaggaaggcaagagaggagctcgtggtgaacctggtgctgct ggtcctgtgggaccacctggagagaggggagctcccggcaatcgtggcttccccgggcag gacgggttggctggacccaagggtgctccaggcgagcgcggccccgctggcctggcgggt cccaaaggagccacgggtgatcctggacgtcccggagaacccgggctgcccggagccagg ggtctcaccggccgcccgggcgacgctggacctcaaggcaaagtcggcccgaccggcgct cctggcgaggacggtcgccccggtccccctggcccacagggggctcgtggccagcccggt gtgatgggtttccccggtcccaaaggtgctaacggtgagcctggaaaagccggtgagaaa ggactccccggtgccccagggctgcggggtcttcctggcaaggatggtgagatgggagct gccggccccccaggacccgccggtcctgcgggtgagagaggagagcaaggagcccccggg ccctccggtttccaggggctgcctgggccaccaggtccccccggtgagagcggcaaaccc ggagatcagggtgttcccggagaagccggtgcccccggtcttgttggtcccagaggtgaa cgcggcttccccggtgaacgtggctctcccggtgcacaaggactgcaagggccccgcggg ctccccggcacgccgggcaccgacggccccaagggtgcaaccggcccagccggccccacc ggtgcccagggtcccccagggctgcagggaatgcccggtgagagaggagccgccggcatt gccgggcccaagggagaccggggagacatcggagagaaaggtcctgagggagcccccgga aaggatggcgcacgcggtctgacaggtcctatcggcccccctggccccgctggccccaac ggcgagaagggggaatctggtcctcctggtccatccggtgctgccggtgcccgcggtgcc cctggtgaacgcggtgagccgggtgcccccggtcccgccggatttgccggccccccgggc gccgacgggcaacccggtgccaaaggtgaacaaggagagcctgggcagaaaggtgacgcc ggctctcccggtccccaaggtccctctggagctcctggcccacagggtccaactggtgta actggtcccaaaggagctcggggtgcacagggtccccctggagccaccggattccccggc gctgccggccgagtgggaccccccggccctaatggtaacccaggccctcctggtcctcct ggctctgctggcaaagagggtcccaaaggttctcgtggtgatgccggtcctccgggccgt gccggcgaccctggcctccaaggccctgctggaccccccggcgagaaaggcgaacccggt gaagatggccccgcgggtcctgatggtcctcctggtccccaaggcttggcgggacagcgt ggcatcgttggtcttcccggccagcgtggtgaaagaggcttccccgggctgcccgggcca tcgggcgaacctgggaaacaaggcgcccccggctctgcaggcgaccgaggtccccccggc cctgtgggtcccccgggtctgacaggtcctgctggtgaacctggacgtgaggggaacccc ggcgcggatggaccccccggcagagacggcgcagccggcgtgaagggcgatcgtggtgag acgggtcccgttggtgcccctggtgctcccggtgcccccggcgctcccggtcctgtcggt cccaccggtaaacaaggagacagaggcgaggcgggtgcacaaggtcccatgggtccctcc ggtcctgctggcgctcgaggcatgccgggtccccaagggcctcgcggtgacaagggggag acaggagaagctggagaaagagggctgaagggccaccgcggcttcaccgggctgcaaggt cttcccggaccacccggtccttctggagaccaaggtgctgctggtcctgcgggtccctcc ggtcccaggggtccccccggtcccgttggcccctctggcaaagacggctctaacggcatg cccggccccattggtcctcccgggcctcgaggacgaagcggtgaaccaggtcctgcgggt cctcctggaaacccaggtccccccggtcctcccggccctcctggcaccggcatcgacatg tcagctttcgctggcctgggtcaaccggagaaaggccccgaccccatccgctacatgcgg gcggatgaagctgctggtggcctgcggcagcacgacgtcgaggtggacgctacgctcaag gccctcaacaaccagattgagagcatccgcagccccgagggctccaagaagaacccagcc aggacctgccgtgacatcaagctttgccatcctgagtggaagagcggagactactggatc gacccgaaccaaggctgcaccttggatgccatcaaagttttctgcaacatggagacgggc gagacctgcgtctaccccacccctcgcagcatccccaagaagaattggtggaccagcaag accaaagacaagaagcatgtctggtttgcagagaccatcaatggcggtttccactttagc tacggcgatgaagacctggctcccaacactgccaacatccagatgaccttcctccgcctc ctgtccaccgaaggctctcagaatgtcacttatcactgcaagaacagcatcgcctacatg gacgaggagacaggcaacctgaagaaagccatcctcatccagggatccaacgatgtggag atcagagccgagggcaacagcaggttcacctacagcgtcttggaggatggttgcacgaaa cacactggcaaatggggcaagacagtcatcgagtaccgatcgcagaagacctcgcgtctg cccattgtagatattgcacctatggacattggtggagccgagcaggaatttggcgtggat attggcccagtctgcttcttgtaa

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