Cuculus canorus (common cuckoo): 104055752
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Entry
104055752 CDS
T08597
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104055752 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104055752 (TRIP13)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
104055752 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_14
AAA_18
Viral_helicase1
AAA_5
AAA_24
IstB_IS21
RuvB_N
NPHP3_N
Cytidylate_kin
AAA_28
TsaE
NACHT
bpMoxR
AAA_7
AAA_25
DUF815
RNA_helicase
AAA_30
ATPase_2
AAA_33
AAA_11
ABC_tran
AAA_17
TIP49
ATPase
PduV-EutP
Rad17
Mg_chelatase
AAA_19
AAA_3
SLFN-g3_helicase
PhoH
NB-ARC
NTPase_1
nSTAND1
nSTAND6
Motif
Other DBs
NCBI-GeneID:
104055752
NCBI-ProteinID:
XP_053913285
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All DBs
Position
2:complement(100317748..100332411)
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AA seq
432 aa
AA seq
DB search
MDEAAGDLKQALPNVCDNIQIHVEVHQKSSSAAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDGFLNSNVQSVSIVDTELKLKDRQPIDLTKSSLSLHIFHLNEEGPSSENLEEENEDII
AANHWVLPAAEFHGLWESLIYDSEVKSHLLDYVTTTLLFSDKNVDDNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIRELI
DDKDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRCPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSRLSLVLKEISRKSEGLSGRLLRKLPFLAHALYIQSPSVTMTTFLQALSLAVDK
QFEERKKLADAV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagccgctggggatttgaagcaagcgctcccaaatgtgtgtgacaacattcaa
atacacgtggaagttcatcagaaatcgagcagtgcggccaagaaagaagatatcaggatg
agtgtcttaaagctgctaaacagacataacatcgtttttggtgattacaagtggacagag
tttgatgatggtttccttaacagcaatgtgcagtctgtgtcgattgtggatacggagctg
aaattgaaggacagacagcctattgacttgaccaaaagcagtctttctcttcatattttt
catctgaatgaagaaggaccaagttctgaaaacctcgaagaagagaatgaggatatcatt
gcagctaaccactgggtgctaccagcagctgaattccatggcctttgggaaagtcttata
tatgacagtgaagtaaaatcacacttacttgattatgtgacaacaacattactattttct
gacaaaaatgttgatgacaacctgatatcatggaacagagttgttttgctgcatggtcct
cctggaactgggaaaacctctctctgtaaagcattggctcagaagctgacaattcgactg
tcgtacaggtataggtatggacagttaattgagataaacagccacagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagattcgagagttaatt
gatgacaaagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgctttcaaggcaggcacagagccttcagatgctattcgtgtggtgaatgctgta
ctgacacaaatagatcagattaaaaggtgtcccaatgtagttatcctgactacttcaaat
attactgagaaaattgacatggcctttgtagacagggctgacataaagcaatacattgga
cctccatccactgcagcaatatttaggatatatctttcttgcttggaagaactgatgaag
tgtcaaataatatatcctcgacagcagctcctgacactcagagaattagagatgataggc
ttcatagaaaataacgtgtcaaggttaagccttgtactgaaagaaatctcaagaaaaagt
gaaggtcttagcggccgcctcctgagaaaactaccttttctagcacatgcactttatatt
caatcccccagtgttacaatgaccacatttcttcaggctctttcacttgcagtagacaaa
cagtttgaagaaaggaagaaacttgcagatgctgtgtga
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