Cuculus canorus (common cuckoo): 104055821
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Entry
104055821 CDS
T08597
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055821 (STXBP5L)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104055821 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104055821 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Synaptobrevin
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
104055821
NCBI-ProteinID:
XP_009555301
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All DBs
Position
1:123509622..123707016
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AA seq
1190 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGGSSSSSGSGGGSGAGGSSAHPGGTAGAAGTPREEVQETLTS
DYFQICKTVRHGFPYLPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQ
LQFLINEGALVSASADDALHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTER
GNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFW
DLRSKRADLRAYYDEAIHSVAWHHEGKQFMCSHSDGSLTLWNLKSPNRPFQTTIPHGKIQ
RDGKKTESCKPILKVEYKTCKNSEPFVIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHP
IVDFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPIDIHESPVTCTE
YFADCPPDLIPVLYSVGAKHKKQGCSNKEWPISGGAWNLGAQTYPEIIITGHADGSVKFW
DASAITLQMLYKLKTSKVFEKQKPGEGKATAEIVEEDPFAVQMMYWCPESRIFCVAGVSA
YVIVYRFSKHEVNTEIASLEVRLQYEVEDIITPEPEIIPPFPDASSQLPSLKSLSGSTNT
VACEGTMKDSIPCLSVKTRPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVNSAYGLVAF
GNCNGLAVVDFMQKTVLLSMGTLDLYGSSDPYQRQPRSPRKSKQFAADNFCMRGLSNFYP
DLTKRIRTSYQSLTELSDSPVSLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVS
KANRRGPGRPPFRKAQSAACMEISLPVTTEENRENSFSRSRSSSVSSIDKDSKEAITALY
FMESFARKNDSAVSPCLWVGTGLGMVLILSLNLPASDDLRQSEPVMVSPSGTVLTLKGAV
LTFACLDCMGTLTHPPYEVWRDPHSADDGEKTRKRKLVMHSPSSSQDMGDHQFAVICSEK
QAKVFSLPSQSCLYVHNITETSFLLRADVVTLCNSVCLACFCANGHIMTLSLPSLRPLLD
MNYLPVTDMRIARTFCFSNEGQALYLSSPTEIQRLTYSQEMCDNLQDMLGDLFTPVETPE
AQNRGFLKGLFGGSGQAFDREELFGEATAGKASRSLAQHIPGSGGIEGVRGAAGGVIGDL
TRARIALDERGQKLGELDEKTASMMASAEAFSKHAHEVMLKYKDKKWYQF
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaattttcgcaaagttttggatggtttaactgcctcatcccccggtgga
agcagcagcagcagcggcagtggcggtggaagcggggctggcggtagctccgcgcaccca
ggagggactgcgggagctgcagggactcccagagaggaggtccaggagacgctcacttca
gattattttcagatttgtaagacggttcgccatggttttccttatctacccactgcctta
gcttttgacccagttcagaaaattctggcaattggaacaagaacaggagcaatacgaata
ttgggcaggcctggtgttgattgctactgccaacatgaaagtggtgctgcggtcctgcag
ctccagttcttaatcaatgagggtgctttggtcagtgcaagtgcagatgatgcacttcat
ttgtggaatctccgacagaaacgaccagctatcctacattctctgaaatttaacagagaa
aggattacttactgtcacctacctttccagagtaaatggctttatgttggaacagagagg
ggaaatacacacattgtaaatattgagtccttcattctttcaggatatgttatcatgtgg
aataaggcaatagaactatccacaaagactcaccctgggccagttgtacatttaagtgac
agcccaagagatgagggaaaactactgataggctatgaaaatgggactgttgtattctgg
gacttacgatctaaaagagctgatttaagagcctactatgatgaggctattcattctgtt
gcttggcatcatgaagggaaacagttcatgtgcagtcactctgatggcagcttgactcta
tggaatctgaaaagccctaacaggccattccagaccacgataccacatggaaaaattcaa
agagatggaaaaaaaactgaatcttgtaaaccaattcttaaagtagagtacaagacttgt
aaaaacagtgaaccatttgtgatattttctggtggactgtcatatgataaggcttgtcga
agaccaagtttaacaatcatgcatgggaaagcaattacagttcttgaaatggatcaccct
atagttgattttttaactctgtgtgaaacgccatatccaaatgaatttcaagaaccctat
gctgtagttgtgcttttggaaaaagatctcattgttgttgacctgacgcaaagcaatttt
ccaatctttgaaaatccatatcctattgacattcatgagtcacctgttacctgcacagaa
tattttgcggactgtcctccagatttgattcctgtactctattctgtaggagcaaaacat
aaaaagcaaggatgcagcaataaggagtggcctatcagtggtggagcatggaaccttgga
gctcagacctatcctgaaatcattattacaggccatgcagatggatcagtaaagttttgg
gatgcttctgccattaccctgcagatgttgtacaaattaaaaacatcaaaggtctttgaa
aaacagaaaccaggagaaggaaaagcaacagctgagattgtagaagaagatcctttcgct
gttcagatgatgtactggtgtcctgaaagccgaattttctgtgtggcaggagtttctgca
tatgtgattgtttacaggttcagtaaacatgaagtaaatactgaaattgcatcattagag
gtacgacttcagtatgaagtagaagatatcattactcctgaaccggaaataattcctcca
tttccagatgcctcctcccagcttccttctttaaagagcctttcaggcagtaccaacact
gtagcatgtgaaggaacgatgaaggatagtatcccatgtcttagcgttaagacgcgacct
gtgcgaatgcctcctggatatcaagcagatctggttattcagttggtgtgggtggacggt
gaacctccacaacagatcaccagtcttgctgtaaactctgcttatggactagtggcattt
ggaaactgcaatggtttggccgttgtggacttcatgcagaagacagtactgctgagcatg
ggaacccttgacctatatggatcaagtgatccataccagcgtcaaccacgttcacctcgc
aaaagcaagcagtttgctgcagacaacttttgcatgcgtggcctgtctaacttttatcca
gatttaacgaaacggatccgtacttcctatcagagcctgactgaactcagtgacagtcca
gtttccctggagctagagcgttgcaagtctcccacttcagatcatgtgaatggtcactgt
acaagtccaacatcccagagctgcagttcaggaaaaaggctttctagtgcagacgtctca
aaagcaaatcgccgagggcctgggaggccccccttcagaaaagcacagtctgcagcctgc
atggagatttctctcccagtcacaacagaagaaaatagggaaaactctttcagccgttcc
cgaagctccagcgtgtccagtatcgacaaggactcaaaggaggcaatcactgctttgtac
ttcatggagtcctttgcccgaaagaatgactctgctgtctccccatgtctctgggttgga
acaggccttggtatggtcttaatcctctcccttaatctgcctgctagtgacgacttgcgg
cagtcagagccagtcatggtgtcgccaagtggcacagttctgacactgaaaggagccgtg
ctgacctttgcttgcttggactgcatggggacattgacgcatccaccatatgaagtatgg
agagacccacacagtgctgatgatggtgaaaaaacaaggaaaaggaaacttgtcatgcat
tccccttcctcctcccaggatatgggtgatcatcaatttgcagtcatctgttcagaaaaa
caagccaaagtcttctcattgccttcccaatcatgtctttatgtccacaacatcaccgaa
acgtcctttttattgcgagcagatgtggtcaccctctgtaacagcgtctgtctggcgtgc
ttttgtgccaatgggcacatcatgactctgagcttgcccagccttcgccctctgctcgac
atgaactatttgcctgtgacagacatgaggatagcacggaccttttgtttcagtaacgaa
gggcaagctctgtacctcagctctcccacagagatccaacgtctgacgtacagccaagag
atgtgtgacaatctgcaggacatgcttggagatttgtttactcctgtggaaacgccagaa
gcccaaaacagaggcttcctcaaaggactttttggaggaagtggacaagcttttgacaga
gaggaactttttggtgaggccacggcaggaaaagcctctcggagtctcgctcagcacatc
cctggatcaggtggaattgaaggcgtgagaggagctgcaggaggagtcattggggacttg
actcgtgcacgcattgcccttgatgagagaggacagaaactgggagaactggatgaaaag
actgccagcatgatggcgagcgctgaggcattttccaaacatgcacacgaggtgatgctg
aaatacaaggacaaaaagtggtaccagttctag
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