Cuculus canorus (common cuckoo): 104055834
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Entry
104055834 CDS
T08597
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104055834 (TTF2)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104055834 (TTF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
104055834
NCBI-ProteinID:
XP_053912191
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All DBs
Position
1:complement(118632039..118654570)
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AA seq
1178 aa
AA seq
DB search
MELVPCVLHGSPCLLKTGVRGGPNQGRSFYVCGVRSPAPCGFVLPAPIPASHCLIHEGCM
VELQVLIQHQGKDEYQLLYRCTKGYSNGKTWCGSIPWQDPKATKVSKALESQHNIAPVFN
PSGQRNPFKVIDKNCDPSSWKQIKQGNGEESRAKGVKAEKESMLASHKEKKSIPASSIEK
EPLEGLKTKNKQSTGNKTDPVFKDSTVPGSKLGISENCKGKNTLWEKEKYGGSGRESKKS
SECVEKEPGGSSKLFPLSLGKQSASTKPAEDEQLGGKSLNSCEDKETRKKEYVGGKNGEV
KLMSKEDMISPVAGKDAFQHPAQKGGGVAAPSRTQIRPELGQAAGAVSGRDTDGVGFVYT
SSGKSEPEESVEDLQSREILAGKSGTSLPGAAASHHVEGLQDPKALYNHLVVQLRQKKSV
LATVNTQRLPDKGERLRKQVQDLEAALSAFKISTAGTTGKGEHSTSSDYHEEPLPTQLDR
PGGTKLITPQLLQNPASGTSSCSHSHTSAATTLGSSEYGSSHGFGMNSGVQNLYGGRMTE
DRIRAVHSATSEAINHLHKSLESCPTEQTTAENPSGLKVPLLPHQKQALAWLLWRESQRP
CGGILADDMGLGKTLTMIALILTQKQLNTEKRKEEKLEIWLSKNDSAVIPSHSTLIICPA
SLIHHWKKEIDRRVSYGKLRVCLYHGSNREKHAEVLTGYDIVVTTYSLLSKEVPTSKEEG
EVPAEDHDVRSGSSPCSPLLRIAWARIILDEAHNIKNPKIQTSIAVCKLRASARWAVTGT
PIQNNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGERLSLLTRSLLLRRTKDQLDS
AGKPLVALPQRSTQLHQLKLSPEEQSVYNVLFARSRSTLQSYLQRQEQKNEGREYAGGNP
FERVAQDFGINQKEFLAGSQSAPQVSSTVHVLSMLLRLRQCCCHLSLLKVALDQTNLHSE
GLTLSIEEQLSALTLTELQTPDYKSTVYLSGTAFKTDLFEITRESTKIAHLLAELKTIQS
HSEPQKSVVVSQWTSMLKVVSVHLQRLGLKYATVDGSVNPKQRMDVVEEFNNNPRGPQVL
LVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCEGTVEE
KILQLQRSKKVLAQQVLSGKGETFTKLTLDDLKNLFGI
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtgccgtgcgtcctgcacgggtccccgtgcctcttgaagaccggagtccgc
ggtggccccaaccagggtcggagcttctacgtgtgcggagtgcggagcccggcgccctgc
ggcttcgttctgccggcacctattcctgcttctcactgcttgatccatgagggatgcatg
gtggaactgcaagtcctgattcaacatcagggcaaagatgagtaccagttgctttaccga
tgcactaaaggttattcaaatgggaagacatggtgtggaagcatcccgtggcaggatcca
aaagctaccaaagtgtcaaaagcgttagaatcccagcacaacatagcacctgtcttcaat
cccagtggccaaagaaatccattcaaagtcatagataagaattgtgatccatcatcctgg
aaacaaattaagcaagggaatggagaagaaagtagagcaaaaggagtaaaagcagagaaa
gaaagtatgctggcgtcacataaagagaagaaatcaatccctgcttcctccatagagaaa
gaacctctagaagggctgaaaactaagaataagcaatccacaggcaataagactgatcca
gtatttaaggatagcacagtgcctggatctaaacttggcatttctgagaactgcaaaggg
aaaaacaccctttgggagaaagagaaatatggtggcagtggcagagaatccaagaagtct
tctgagtgtgtggagaaagagccaggtgggagctcaaagctctttccactaagtcttgga
aagcaaagtgcaagtactaagcctgcagaggacgaacagctcggagggaaaagtctaaat
agctgtgaggataaagaaaccagaaagaaagaatacgttggtggtaagaatggagaggtg
aaactaatgtctaaagaagatatgatttccccagtagcaggaaaggatgctttccaacac
cctgcccagaaaggaggaggagtggcagcgccgtccaggacacaaatcagaccagagctg
ggacaggctgctggtgcagtctctggcagagacactgatggagtaggatttgtttatacc
tcatcaggtaaaagcgaacctgaggaatcagttgaggacttgcagtcaagagagattctt
gcaggaaaatcggggacatctttgccaggagctgcagcatcacatcatgtggaaggactc
caggaccctaaagctctttacaaccatcttgtcgtccagttgcggcagaagaagagtgtg
ttggctacagtgaacactcagcggctgccagataaaggggaacggttgcgaaagcaagtg
caggatttggaagctgcactcagtgcttttaaaatttcaacagcaggtactactggaaaa
ggggaacatagcacaagcagcgattaccatgaggagcctttgcctacccaacttgacagg
ccaggtggtacaaagctgataacaccacaactgctccagaatcctgcatcagggacctct
tcatgctcacacagtcacacctctgctgctactactttgggttccagtgaatatggttca
agccatggttttggaatgaactctggtgtgcagaatctatatggaggaagaatgacagaa
gaccgaatcagagctgtacacagtgccacaagtgaggctattaatcatcttcacaaatct
ctagagtcctgtccaacagagcagacaacagctgaaaatccctctggactgaaggttcca
ctgctgccacaccaaaaacaagcacttgcatggctcctctggagagagagtcagaggcca
tgtggaggaattctggcggatgacatgggcttggggaagactctaacgatgattgctctc
attctgacccagaagcagctgaatacagagaaaagaaaggaggagaagttagaaatatgg
ctatccaaaaatgattcagcggttatcccttctcacagcactttaataatttgtcctgca
tccttgatccaccactggaagaaagagattgacagacgtgtaagctatggcaaactgagg
gtctgtttgtaccacgggtccaatagagagaaacacgcagaggtgctcactggatatgat
attgttgtcacaacctacagccttctttccaaggaagttcccacaagcaaagaggagggg
gaagtccctgctgaggaccatgatgtgaggagtgggtcatctccctgttcccctctgctc
aggatagcttgggctcgaattatattggatgaagctcacaatattaaaaacccgaagatt
caaacctccatagctgtatgcaaactgagagccagtgccagatgggctgtcactgggaca
ccaatacagaacaacttactggatatgtactctctcctgaggtttctacgttgctctcct
tttgacgagtacaaggtgtggaagtaccaagtagataacaacacgaaaaagggaggagag
aggctgagtctcttaaccaggagcctcttattacggagaactaaggaccagctggattca
gctggcaagcccttggtagctctaccccagcgtagcacacagttacatcagttaaaactt
tcaccagaggagcagtccgtgtacaatgtgctttttgcaagatccaggtcaacactacaa
tcctacctacagagacaagagcagaaaaatgaaggcagagagtatgctggtggtaacccg
tttgagagagttgcacaagactttgggatcaatcaaaaggaattcctagcaggctcacaa
agtgccccccaagtctcaagtactgtccacgtcttgtctatgctgttgaggcttcgtcag
tgctgctgccatctctctttgctgaaagtggctcttgaccaaactaaccttcatagtgaa
gggcttaccctctccattgaggaacaactcagcgctttgactctgactgagctccagact
cctgattacaagtcaacagtctacctcagtggcacagcttttaaaactgatctctttgaa
atcaccagggagagcaccaagatagctcacctcttggctgaactgaaaactattcagagt
cactcagagcctcagaaaagtgttgttgtgtctcagtggacaagtatgttgaaggttgtg
agtgttcacctccagcgactagggctgaagtatgcaacagtggatggctctgtcaatcct
aaacagagaatggatgtggtagaagagttcaacaacaatcccagagggcctcaggtactg
ttggtctcgttgctggctggaggtgttggcctgaacttgactggaggaaaccacctgttt
ctccttgacatgcactggaatcctgctcttgaggaccaggcatgtgaccgcatttaccga
gtggggcagcagaaggatgttgtgatacacaggtttgtctgtgaaggaacagtagaagaa
aagatcctacaactccagaggagcaagaaagttcttgcccagcaggtgctgtcaggcaaa
ggggaaaccttcactaagctcactctggatgacctcaaaaatctctttggcatttaa
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