Cuculus canorus (common cuckoo): 104055873
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Entry
104055873 CDS
T08597
Symbol
SIDT1
Name
(RefSeq) SID1 transmembrane family member 1 isoform X1
KO
K26111
SID1 transmembrane family member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055873 (SIDT1)
Membrane trafficking [BR:
cuca04131
]
Endosome - Lysosome transport
Others
Others
104055873 (SIDT1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SID-1_RNA_chan
DUF6126
PH_13
Motif
Other DBs
NCBI-GeneID:
104055873
NCBI-ProteinID:
XP_053916897
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Position
1:123902933..123952631
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AA seq
824 aa
AA seq
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MAGAAAQRRAPGALLCALLCAAAAGVQPAGTPETGAFGRVYRGAVSISAERVYAFAYRSQ
PGQVDAVRVYVNSSSENLQYPVLFVVRQQKGVLSWQVPLIFRGLYQRTYNYQEVSRTLCP
SEPTPEAGPSDQIIFVDVASMAPFNIAYELLVTRLENFQLETNKAFNFTASPSQPQYFLY
KFPQDVDSVIIKVVSDAAYPCSVVSVQDIVCPVYDLDHNVEFNGVYQSMTKQAAITVQRK
DFPGEQFFVVFVIKPEDYACGGTVPSSIHGNVNRTWNLQRTKNLQVMIEPSIKKSVYVQA
MFFSFLSFLSFYLGSVVVAFVHYIRVRRKASAGRLSPDDGSGIMTSSHPITASTPEGSSY
GAIDESSSIGGRQLSSPERGLPPGSDTDSSVEEDSDFDTMPEIESDKNVIRTKVFLYLSD
LSRKDRRIVSKKYKIYFWNIITIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHP
LGVLSAFNNVLSNVGHLLLGFLFLLIVLRRNILHRRAMERKDVYTLDYGIPKHFGLFYAM
GIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLKLYQTRHPDINASAYSAYASF
AVVICLAVLGVVFGKNDMWFWVIFSMIHVLASLALSTQIYYMGRFKIDGPDSDLGIFRRA
AMVLYTDCIQQCSRPLYMDRMVLLIVGNLVNWSFAIFGLVYRPRDFASYILGIFICNLLL
YLAFYIIMKLRSAEKLLPIPLFCIMATAVVWAAALYFFFQNLSSWEETPAESREKNRPCI
LLGFFDDHDVWHFLSAAALFFSFLVLLTLDDDLDMVRRDKIPVF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccgcggcgcagcgcagggcgcccggggcgctgctgtgcgccctgctctgc
gcggcggcggcgggtgtgcagcccgcgggcacccccgagaccggcgccttcggccgcgtc
taccggggcgccgtcagcatcagcgcggagcgggtctatgccttcgcctaccggagccag
cccgggcaggtagatgcagtgcgggtgtatgtgaacagcagttccgagaacctccaatat
cctgtcctgttcgtagttcgccagcagaagggagtgctgtcatggcaggtcccactaatt
tttcgaggcctctaccagaggacctacaattaccaagaagtgagtcggaccctctgtcct
tctgagccaacacctgaggcaggaccttccgaccagattatatttgtggacgtggcttcc
atggcaccatttaatattgcgtatgagctgctagtcaccaggctggagaacttccaactt
gagaccaacaaagcctttaacttcactgccagcccttcccagccccagtattttctgtac
aagtttcctcaggatgtcgattcagtcattattaaagtggtgtctgatgcagcctaccca
tgctcagttgtctccgtccaggatattgtgtgccctgtgtatgatctggaccataatgtg
gagttcaacggtgtttaccagtctatgacaaagcaagcagctataacggtgcagagaaag
gacttcccgggtgagcagttctttgttgtgtttgtcatcaagccggaggattatgcctgt
gggggtactgtgccttcctccatccatgggaatgttaaccgtacctggaacctgcagcga
acaaagaaccttcaagtgatgattgaaccctctattaaaaagtctgtttatgtccaggcc
atgttcttcagcttcctgagtttcctctccttttacctgggctcagtggtggttgctttt
gtgcactacatcagggttcggaggaaggcttcagctgggagattgagtcctgatgatgga
tctgggattatgacatcttcacatcctatcacagccagcacccctgagggaagcagctat
ggtgctattgatgaatcaagctccattggtggacggcagttgtcttctcctgagcgtggg
ctgccgcctggttctgacacagacagctctgtggaggaggacagtgactttgacaccatg
ccagaaattgaaagtgataagaatgttatccgcaccaaggtgttcctctatctatcagac
ttgtccaggaaggaccgacggattgtcagcaaaaaatacaaaatctatttctggaacatc
atcaccattgcagtgttctacgccctgccagtcatccagcttgtcatcacttaccagacg
gtagtgaatgtgacgggcaatcaggacatttgctactacaactttctgtgtgcccatccc
cttggtgtgctgagtgccttcaacaacgtcctcagcaatgtgggccacctgctgctgggc
tttctcttcctcctcatagtgttacgcaggaacattctccaccgtcgggccatggagagg
aaagatgtctataccctggactatgggatcccaaagcattttggtctcttttatgctatg
ggcatcgctctgatgatggaaggtgtgctcagtgcctgttaccatgtctgccctaattac
tcaaatttccagtttgacacctccttcatgtacatgatcgcaggactgtgcatgctcaag
ctctaccagacccgccatccagacatcaatgccagtgcctactctgcctatgcctcgttt
gctgtagtcatctgtctggctgtccttggagtggtgtttgggaaaaatgatatgtggttt
tgggttattttctcaatgatccacgttttggcttcgctggctctcagcacccagatctac
tacatgggacgcttcaagatagatggccctgactcagacttggggatatttcgacgggca
gcgatggtgctgtacacggactgtatccagcagtgcagtcgaccattgtacatggacagg
atggtgctgctcattgttggaaacctggtcaactggtcctttgctatctttgggctggtg
tatcggcccagagacttcgcctcctacatactgggcatctttatctgtaacttgttgcta
tatctggctttctacatcatcatgaagctccgcagtgctgagaagctcctgcccattccc
ctgttctgcatcatggcaacagcagtggtgtgggcagctgccctctacttcttcttccaa
aacctcagcagctgggaggagactcctgcagaatcccgggaaaagaaccggccatgcatc
ctgctgggcttctttgatgaccatgacgtctggcatttcctctccgcagctgccttgttc
ttctccttcctggtcctgctgaccctggatgatgacttggacatggtgcgcagggacaag
atcccagtgttctga
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