Cuculus canorus (common cuckoo): 104055893
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Entry
104055893 CDS
T08597
Symbol
PLD4
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00564
Glycerophospholipid metabolism
cuca00565
Ether lipid metabolism
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
104055893 (PLD4)
00565 Ether lipid metabolism
104055893 (PLD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055893 (PLD4)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
104055893 (PLD4)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104055893 (PLD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
104055893
NCBI-ProteinID:
XP_009555379
LinkDB
All DBs
Position
5:6198540..6213171
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AA seq
504 aa
AA seq
DB search
MFNESSNMKLRMNNQKDIKTFQILCAILMLGLVVLMAVYFIRVDRITDPKGEEAVISLYK
EVEEEERLYKDVLGTRIIEEDTNKSNDSCSFELVENIPYDLAFEINSTAAKPLYQAWMRL
LDMAQEKIHVASYYWSLTGKDISVNDSSSKQGEDILKRFERLLAENVSVYVAASVPTLAT
NSTDLEFLEEKGAHVKKINFGHLAGGVLHSKFWIVDMKHIYIGSANMDWRSLSQVKEFGV
VIYNCSCLAKDLWKTFSTYWDLGYANATVPFPWSFNYSTHINKHRPLEVEFNGTLTKAYF
SASPPAFCPEGRTYDLFAIISIISEAQEFVYVSVMEYFPTSRFVHPQRYWPAIDNALRRA
AFNHRVQIRLLVSCWTYTDPAMLYYLRSLRALNNPQAHISVDVKLFIVPVLNHTNIPHGR
VNHNKYMVTDKVAYIGTSNWSEDYFVSTAGVGLIIKQNLTNLQRRQLPIQEQLKNLFERD
WNSKYAVNLEDVQGYKDCNWMCRI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgagtcctccaacatgaaattacgcatgaacaatcaaaaagacatcaaaacg
tttcaaatcttatgtgcaattttgatgcttggtcttgttgtcctgatggccgtttacttc
ataagagtggacaggataactgatcctaaaggagaagaagctgttatcagcctctataaa
gaggtggaggaggaagaaagactctataaagatgtcctaggaacgagaataattgaggag
gacaccaataagtcaaatgattcctgcagctttgaacttgtggaaaacattccatatgac
ttagcttttgaaataaatagtaccgcggccaaacccttgtaccaagcctggatgagactc
cttgatatggcccaggaaaaaattcatgtggcttcttactattggtctcttactgggaag
gatatcagtgtcaatgattcatcttccaagcagggtgaagatattctgaagaggtttgag
agattactcgcagagaatgtctctgtgtatgttgcagcaagtgtaccaactttggctaca
aattcaactgaccttgagtttctagaagaaaaaggggctcatgtaaagaagatcaatttt
ggacatttggcaggaggagtgttgcatagcaaattctggattgtagacatgaaacacata
tatatcggtagtgcgaatatggactggagatctttatctcaggtgaaagagtttggtgtt
gtgatatacaactgcagctgcttggccaaagacctctggaaaacatttagcacttactgg
gatcttggatatgctaatgccactgtcccatttccttggtcttttaattattctactcac
attaacaagcatcggcctctggaagtagaatttaatggaaccttgacaaaagcctacttt
tctgcttctcctccagcattttgtccagaaggtcgaacctatgacctctttgctataatc
agtattatcagtgaggcacaggaatttgtctatgtttctgttatggaatatttccctacc
agccgtttcgttcatccacaaaggtactggccagccatcgacaatgctttgagacgtgcg
gctttcaaccacagagtacaaatccggcttctggtcagctgctggacctacactgaccca
gccatgctctactaccttaggtccctgcgtgctctcaacaacccacaagcccacatcagt
gttgacgtgaaactcttcattgttccagttctgaatcacacaaatattcctcatgggagg
gtgaatcacaacaaatatatggtcactgataaagtagcctatattgggacttccaattgg
tcagaagattacttcgttagtacagctggcgtgggactaattatcaaacagaatttgacc
aacctgcaaagaaggcaactgcctatccaggaacaattaaaaaacctttttgaacgagat
tggaattccaaatatgcagtgaacttggaagatgtacagggatataaagactgtaactgg
atgtgcagaatctga
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