KEGG   Cuculus canorus (common cuckoo): 104055909
Entry
104055909         CDS       T08597                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cuca01009]
    104055909 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cuca03036]
    104055909 (KDM5A)
Enzymes [BR:cuca01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104055909 (KDM5A)
Protein phosphatases and associated proteins [BR:cuca01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104055909 (KDM5A)
Chromosome and associated proteins [BR:cuca03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104055909 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 104055909
NCBI-ProteinID: XP_053933001
LinkDB
Position
1:143508843..143565542
AA seq 1693 aa
MAGGGGSRYAAEFVPPPECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPP
FACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGL
SKIVASKGGFEVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
IQKQNLDLKEKVEAEDLSSDAQASPKQASRMNVVLKRTRRVKSQAEGGEMSRNTELKKLQ
IFGAGPKMMGLTLGTKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVDLYVCLFCGR
GNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREY
TLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSG
FPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINYLHWGEPKTWYGVPSNAAEQLEDVMKELAPELFESQPDLLHQLVTIMN
PNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSH
YRRLGRHCVFSHEELIFKMAADPESLDVGLAAMVCKEMTLLIEEETRLRDSVVQMGVLMS
EEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQKKCLRYRYP
LEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLF
RRLRDAVKEAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDEIPDSSKLQELIDMGSGLYVELPELPRLKQELQQ
ARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRQSMMALEGVVNEAKNIPAYLPNVLALKEALHRARDWTAKVEAVQNGSNYAYL
EQLESLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYSLLQVLSPRTDI
GVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLEEARDTAAVVAIFKEREQKEIEA
MHALRAANLAKMTMVDRIEEIKFCICRKTASGFMLQCELCKDWFHSGCVPLPKMSSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSA
FNRVIGSVSSSPRQTLDYDDEETDSDEDVRETYGYDIKDNASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRD
SSERKRKRKLERAEQFFGDMKQKSKELKKLEKPKKKKLKLTIDKTKELNKLAKKLAKEEE
RKKKQREKAIVPKVELVKESAEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPC
KDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKPMQGPSSPAHAPPPPFLL
SYKLPMEDLKETS
NT seq 5082 nt   +upstreamnt  +downstreamnt
atggcggggggtggcgggtcgcgctacgccgccgagttcgtgcccccgcccgagtgcccc
gtgtttgagcccagctgggaggagttcagcgacccgctcggcttcatcggccgcatccga
ggcctggccgagaaaaccggcatctgcaagatccggccccccaaggactggcagcctcca
tttgcctgcgaagtacaaagttttcgtttcactccacgaattcagcgcctgaatgaactg
gaggcaatgacaagagtgaagctggacttcttggatcagttagcaaaattttgggaactc
caaggatccaatttaaaaatccctgtagtagagagaaaaatactggatctctatggtctg
agcaagattgttgccagcaaaggaggctttgaagtagtcactaaagagaagaaatggtct
aaagtggcaagtcggcttggctacctgccaggaaaaggcacagggtcgttactgaagtct
cattatgaacgaatcttgtacccctatgagctcttccagtctggggtcagccttatgggc
atccaaaagcagaacttggaccttaaggaaaaagtggaagctgaggacctcagctcagac
gctcaggcttccccaaagcaggcttcaagaatgaacgttgtgctgaagagaaccaggcgt
gtcaaatcccaggcagagggaggagaaatgagtagaaatactgaactaaagaagctgcag
atctttggagctggacccaagatgatgggattgacattgggaacaaaggataaagaggat
gaggtgacacgaagacgcaagggaaccagatcagaagcatttggaatgcagatgaggcaa
cgcaaaggaactctttctgtcaactttgttgatctatatgtttgcttattctgtggcaga
ggaaataatgaggacaaactgctactgtgtgatggatgtgatgacagctatcatactttt
tgcttgattcctcctttacctgatgtacccaaaggtgactggaggtgtcccaagtgtgtt
gctgaggaatgcaacaaaccccgtgaggcctttggatttgaacaagctgtcagggaatac
actctccagagctttggtgaaatggctgataatttcaagtctgattatttcaatatgccg
gtccatatggttcccactgagcttgtagaaaaagagttctggcgattggtgagcagcata
gaagaagatgtcattgtggaatatggggctgatatctcatccaaggactttggaagtggc
ttcccagtaaaagatggccgacgaaagctgatgccagaggaggaggactacgcactttct
ggttggaacttgaataacatgccaattctagaacaatcggtccttgctcacatcaatgca
gatatctctgggatgaaggtaccttggctgtatgtggggatgtgcttctcctcgttttgc
tggcatattgaggatcactggagctattccatcaactacctgcattggggagagccaaag
acatggtacggcgtgccctctaacgcagcagagcagctagaggatgtgatgaaggaattg
gctcctgagctgtttgaatcccagcctgatctcctgcatcagctggtcaccattatgaat
cccaatgtactgatggaacacggtgtaccagtgtacaggaccaatcagtgtgctggggag
tttgttgtcaccttccctcgtgcctatcattctggatttaaccagggatataactttgct
gaagctgtgaacttctgcactgctgactggcttcctattggtcgtcagtgtgtgagtcat
taccgaaggcttggacgtcattgtgttttctcccatgaagagctgatcttcaagatggct
gcagatccagagtccttggatgttgggctggctgccatggtctgcaaggagatgactcta
ctgatagaggaggagacacgattaagggattctgttgtacagatgggagtgttgatgtct
gaggaagaagtgtttgaactggttccagatgatgagcgtcagtgcacagcttgcagaacc
acgtgcttcttgtcagctcttacatgttcctgtaatcctgagcgtctggtatgcttatac
catccatctgatttatgtccttgtcccatgcagaagaagtgtctaaggtaccggtaccca
ctggaagaccttccttctttgctatatggagtgaaagttagagcacagtcttatgacact
tgggtcagtagagtaacagaggctctgtctgccaatctcaaccacaaaaaagatgtgatt
gagctgagggtaatgttggaggatgctgaggacaggaaatatccagagaatgaccttttc
cgcaggctcagagatgctgtgaaagaagcagagacctgtgcttcagtagcacagctgctt
ctgagcaaaaagcaaaaacacagcaggcagagccaagatagtggaaggacacggaccaaa
ctaactatggaggagcttaaagcgtttgtgcagcagttgtttagcctgccctgtgttatc
agccaggcccgacaagtaaagaatctgcttgatgatgtagaagaatttcatgagcgtgcc
caagaagctatgatggatgagattccagattcctccaagctgcaggagttgatagacatg
ggctctggcctttatgtagaacttcctgaactgccaaggctgaagcaagaattgcagcag
gcacggtggctggatgaggtgaggtccaccctcttggatccccagagggtcaccctcgat
gtgatgaagaagctgattgactcgggtgtgggcttggcaccgcaccatgctgtagagaaa
gccatggctgagctgcaggagctgcttacagtctcagagagatgggaggagaaggccaag
gtctgcctgcaggcaagaccacgccaaagtatgatggctctggagggcgtcgtgaatgaa
gcaaagaacatccctgcttacctgcccaacgtcctggcgctgaaagaagcactgcaccgg
gctagagactggacagccaaagtggaggccgttcagaatgggagcaactatgcctacctg
gagcaactggagagcttgtcggccaaaggccgcccaataccagtgcgtcttgatgctctg
ccgcagctggagtcgcaggtagctgctgcacgcgcctggagagagcgcacaggaaggaca
tttctgaagaagaactcaagctatagtctgttacaggttctgagccctcggactgatatt
ggtgtttatgggagcagtaagaacaggcggaagagggcaaaggagttgatggagaaggaa
aaggagaaagatcttgatttggaatctctaagtgaactggaagatgggctggaggaggcc
agagacactgcagctgtggtggctatattcaaggagcgggaacagaaggagatcgaagcc
atgcatgctctcagggcagctaacctggcgaagatgactatggtggatcggatcgaagaa
atcaaattctgtatctgtcgcaaaacagctagtggatttatgctacagtgtgagctgtgc
aaagactggtttcatagtggctgtgtgcctcttcccaaaatgagttctcagaagaagggc
tctagttggcaggccaaagaagtgaagtttctgtgtccactttgcatgcgttctcgaagg
ccgcggcttgagactatactgtctctgctggtgtccctacagaagctgcctgtacggctg
ccggagggggaggcattgcagtgcttgacagaacgtgccatgagttggcaggaccgagcg
cggcaggctttggccactgatgagttgtcttctgctttggctaagctttctgtgctcagc
cagcgaatggtggagcaggcagcacgggagaaaacagagaaaataataagtgcagagcta
cagaaagcagcagctaacccagacctgcagggacacttgactagtttccagcaatccgcc
tttaacagagtgatagggagcgtgtcctcatctccacgacagactttggattacgatgat
gaagagacagattctgatgaagacgtcagggagacctatggctatgacataaaggacaat
gccagtgtaaaatcttctagcagcttggagcccaatttgttttgtgatgaggaaatcccc
attaaatcagaggaagtggtgacacacatgtggactgctccctcattctgtgctgaacat
gcttattcatctgcttctaaaagctgctctcaaggttctagcactccaaggaagcagcct
cggaagagtcctctggtacctcgcagtctggagccgcctgtattggagctgtcacctgga
gcaaaagctcagctggaagatctaatgatggtgggagatctactggaagtatcgctggat
gagactcagcacatctggcggattttacaggctacgcatccaccgtctgaggacagattc
cttcatgtcatggaggatgacagcatggatgagaaaccattgaaaatgagagggagagac
tcttctgagaggaagcggaaacgaaagctggagagagcagagcagttctttggagatatg
aagcaaaaatctaaagagcttaaaaaactggaaaaacctaagaagaagaagctaaaactc
accatagataagacaaaggagctgaacaagctggcaaagaaactggctaaggaagaggaa
cggaagaagaagcagcgggagaaggcaattgtgccaaaggtggaattagtaaaggagagt
gcagagaaaaaaagagagaagaaggttctagatattccttccaagtatgactggtcagga
gcagaggagtcggatgatgagaatgctgtatgtgctgcacagaactgccagaggccctgc
aaggacaaagtagactgggtgcagtgtgatggtggctgcgatgagtggtttcatcaagtt
tgtgttggtgtctctccagaaatggctgaaaatgaggattacatctgtataaactgtgca
aagaagccaatgcagggaccaagtagccctgctcacgcaccacctcctcctttcttattg
agctacaaactaccaatggaagatcttaaggagacaagttag

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