Cuculus canorus (common cuckoo): 104055914
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Entry
104055914 CDS
T08597
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104055914 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104055914 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104055914 (NUP98)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104055914 (NUP98)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104055914 (NUP98)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104055914 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104055914
NCBI-ProteinID:
XP_053914928
LinkDB
All DBs
Position
1:complement(68158..115926)
Genome browser
AA seq
1797 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAALTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTATNTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGTFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSNLFSPVNR
ENDDLASPSEYPENGDRFFVSVPPDENHRQDGEREEEEEDHHEVTRFYTNPIAKPIPQTP
ENSVHKQQNSLDDTVVALNMRAALRNGLEGSSEDASFHDDSLQDEREEEPETVYHQHPAG
IVLTRAGYYTIPSMEELARLTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVH
IRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLE
SVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDTKKLKTTPVLPPG
HLPPQQMALNGKPAPPSQPPEMEQLGRVVELDSDMADITQEPPQESVVEDDRTEEPEAVP
ASTHIASTLGINPHVLQIMKASLLADEDDLDLILDCYPGKQALKMNTYQEICSPRLPISK
SQGQKRYSVGGLLQSKFANVIFQPPSAAPQDLSGPRTLSSPLPTAPWSVASPLASAFSVP
PSVPEVQMKTVGVRGQQELVPLEKSITYGKGKLLMDMALFMGRSFRVGWGPNWTLVNCGD
QLSESSEMEDVQCESVQYGFLPAPVAPKSLSESSFKVHVEKLSLEQRKVDKQLYLIPLEI
KLKHSTVHMDEHCPLLAPNPGVSAIHDYADWIRKASEDPGVAETVVKHWCLTWTLCEAIW
GNLKELEASLEEPSEYILTLERRKAFSRWLSETAARRIEEEVSLSRHGNHVEAVFSCLTG
KRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERLRIFA
LLAGKPVWQLSERISINVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTSESE
KYACCPLPPYLEDSGFVVEDNNNTGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPL
DYRLSWHLWEVLRALNYTHLFKQSQGVLNASFAAQLESEGLWEWAVFILLHEPDTYIREK
AVRELLNRHCILSGTPESWAKETFLTQHLCVPLEWIHEAKAVRARMEGDKHKEALFLFKA
GHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLALPERSALIQDWETAGLVYLDYIRVI
EMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSVKDRLAQSDMAKRIANLLRVVLS
LQHAPEPVSDSMPDLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLQELTVVTH
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcttttggaactccatttggaggcagtactggctttgggacaacctca
acatttggacaaaatgccggctttggtactacgagcggaggagcgtttggaacgtcagcc
tttgggtcaaacaataatactggaggcctctttgggagcacacagaccaaaccaggagga
ttatttggttcgactacattcaatcagccagccacctcctccacaagcactggcttcggg
tttggaacatcaactgggacatccaatagcctgttcgggactaccagcaccgggggaggc
ctcttctcatcccagagtaatgcctttgcacagaataagccagctgggtttggaaacttt
ggaacaagtaccagcagtggaggcctctttggaaccactaacactacttccaatcctttc
ggaagtacatccggatctctttttggcccaactagttttaccgctgccctaactggcacg
accattaagttcaatccaccaactggtacggatacaatggtgaaatctggtgttagcact
aacatcaacaccaagcaccagtgcatcactgctatgaaagagtacgaaagcaaatctctc
gaggaactccgtttagaagactaccaagccaataggaaaggcccctccaatcctgtagga
gcgggagcagctgcaggcttgtttggctcttctactgctacatcaagtacagctacagga
ctctttggctcttctaccactaatacaggtttttcatatgggcagaacaaaactgctttt
ggaaccagtacaactggctttggaacaggaacaacagggggtctttttggtcagcagtcg
caaactacgagtctgtttaacaaaccatttggtcaggccacaacaacgcagaacactggc
ttttcatttggcaataccagcactctggggcagccaaacaccaacacaatgggtctcttt
ggggtgacccagccctcgcagcctggaggcctttttggaacagcgaccaatacaaatgct
ggtacagggtttggaactggaactgggctctttggacaagcgaacacgggatttggtgtt
ggtggctcgaccctgtttggtaacaaacctgctggatttggaaccaccacgaccagtgct
ccctcatttggcacaaccaccggtggcgggctctttggttttggtgccaacactgctgga
aatagtttgtttggaaataagcctgcgactgggactctgggaactggactgggaacaggt
tttggaacagctcttggagcaggacagacatctttatttggaaacacccaacctaaactt
ggtgggacactaggaacaggcacgtttggagcaccaggattcaacacatcaacagccact
ctgggcttcggagcccctcagcctgctgtagcactgacagacccgaatgcatcagctgcc
cagcaggcggtccttcagcaacatctgaatagcttgacttactcaccctttggagattcc
ccgctctttagaaacccaatgtcagacccaaagaaaaaagaggagaggctgaaaccaact
aacccagcagctcagaaggccttaacgacacctacccactacaaactgactccccgtcca
gcgaccagagtgcgaccaaaagccctgcaatcagctggctcggctaaatctcacctgttt
gatggtctggatgatgatgaaccgtccctgtccaatggtgcattcatgccaaagaaaagc
atcaaaaagttggttttgaagaacctcaacagcagtaatctgttctcacctgtcaatcga
gaaaatgatgacctggcttctccttcggagtacccagagaatggagatcggttctttgtg
tcggtgcctcctgatgaaaaccacaggcaagatggcgagcgagaggaggaggaggaggat
catcacgaagtgaccaggttctacactaaccccatcgccaagcccatcccccagacccca
gagaactctgtgcacaaacagcagaacagcctggatgacacagtcgtggctctgaacatg
cgggcggctttgcggaatggtctggaaggcagcagtgaagacgcctcattccatgatgat
tcccttcaggacgagcgtgaagaggagcctgaaacagtgtatcatcagcatcctgcagga
attgttctaacgagagcaggctattataccatcccatccatggaggagctggcgaggttg
accaatgaccgaaatgaatgtatcgtgacagacttcaccattggccggaaaggttatgga
tcaatttacttcgaaggagaagtaaatctaacaaacttaaatctggatgaaattgtacat
atccgaagaaaagaggttattgtttaccctgacgatgaaagaaaaccacctattggtgaa
ggcttaaatagacgagctgaagttaccttagatggagtctggcctacagataaaacatcc
cgttgcctgataaaaagccctgaacgactggcagaaatgaattatgaaggtagactggaa
tctgtatctcggaagcagggtgctcgattcaaggaataccgcccggagactggatcttgg
gtgtttaaggtggcacacttttccaagtatggattacaagattcagatgaggaagaggag
gagcatccttcaaaagtggacaccaagaagctaaaaactacacctgtgctgcccccagga
catctgccaccccagcaaatggctctgaatggcaagccagcacctccatctcagccccca
gagatggagcagctgggcagggtggtggagctggacagcgatatggcagacatcacccaa
gaacctccccaggagtctgtggtggaagatgacaggacagaggagccagaggcagtgccc
gcttcaactcacatcgcgtcgaccctaggtattaacccccacgtcctacagattatgaaa
gcttcgttgcttgctgatgaagatgacctggatctgatcctggactgttaccctgggaag
caagctctaaaaatgaatacttaccaagagatctgttctccgaggctccccatttcaaaa
tcacaagggcagaaaagatattcagttggtggcctgctgcaatctaaatttgccaacgtc
atcttccaaccaccgagtgctgctccacaggatctcagtggaccaaggacattgagcagt
ccccttcccactgcgccttggtcagtggcttctccgctagcatctgcattctcagtgccg
ccatcagtccctgaggtacagatgaaaacagttggtgtccgcgggcagcaggagcttgta
cctctggaaaagtccatcacctatggaaaagggaagctactgatggatatggcgctcttc
atggggcgctccttccgtgttggctggggacccaactggacccttgtcaattgtggagat
cagttgagtgaatcaagtgaaatggaagatgttcagtgtgagtccgtgcagtatggattc
ctgccagctcctgtcgctccaaaatcattgtcagaatcctctttcaaagttcacgtggag
aagctgagcttagagcaacggaaggtggacaaacagctgtacctcatccctctggagata
aagctgaaacacagcactgtccatatggatgaacactgtcctcttctagcacccaacccg
ggagtgtctgctattcacgactacgctgattggattaggaaggcatctgaggaccctggt
gtggcagaaactgttgtgaagcactggtgcttgacgtggactctgtgtgaagcgatctgg
gggaacctgaaagagttggaggccagcttggaggagcccagcgaatacatcctcaccctg
gagcgcaggaaagccttctctcgctggctgtcagagaccgctgccaggcgaattgaggag
gaagtctctctgtcccgacatggtaatcatgtagaagctgtgttcagctgcctcacaggg
aagagaattggtgaagcttgtaggctggcccagcagtcaggtgaccacaggctcgcactg
ctcctctcccagctggcaggcagccagcctgtgcgggacctcctcaccatgcagctggtg
gactggcaccggctgcaggcagactgcttcatccaggaggagaggctgcggatctttgcc
ctgcttgcgggaaaacctgtgtggcagttatcggagagaataagcatcaacgtgtgctca
ctgctggactggaagcgttgtgttgctgtccacctctggtacctccttcctccaacggca
tcgatctccaaggcactcgccatgtatgagtcagcatttcagaacacatcagagagtgaa
aaatatgcctgctgccccctgcctccttacctggaagattctggttttgtagttgaagac
aacaacaacacaggaagacctctgagagatgtctgcttccatttgttaaagctctacagt
gacaggcactatgatctcgaccagctcctcgatcccaggagtgtgacatctgaccctctg
gactaccgtctcagctggcacctgtgggaagtgctccgagccctgaattacacccatctc
ttcaagcagagccagggggtgctgaatgccagctttgctgcccaacttgaaagcgaaggg
ctttgggaatgggccgtctttattctgctgcatgagcctgatacatacatacgagagaaa
gcagtgcgtgaactcttgaaccggcattgtattctctcggggacaccagagtcttgggcc
aaggagactttcctaacccagcatctctgcgtcccactggagtggattcatgaagcaaag
gcagttcgagcgaggatggagggcgacaagcataaagaagccctcttcttgttcaaagct
gggcactggaaccagtgtcacaagctggttgtcaggcacttggcctcagacgctattatt
aatgaaaactacaagtacctaaaaggattcctggaagatcttgcccttccagagcgtagt
gcactcatccaggactgggagacagcagggctggtctacctggattacatccgcgttatt
gagatgcttgacaggattcaacagctggattgttccacctatgagctggagcggttacac
accaaagtgacatcgttgtgcaacaggatagagcagatccagtgccacagcgtaaaggac
cgtctggctcagtcagatatggccaagcgcattgcgaacctgctgcgagtggtcctcagc
ctgcagcatgccccggaacctgtctccgactccatgccagacctacagcgtgttcctctc
cgcctccttgctccccacatcgggcggctgccaatgccggaggactatgccttggaggag
ctccgcagcctcacccagtcctacctacaggagctgacggtggtgactcattga
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integrated database retrieval system
