Cuculus canorus (common cuckoo): 104055937
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Entry
104055937 CDS
T08597
Symbol
PHAF1
Name
(RefSeq) phagosome assembly factor 1
KO
K27411
phagosome assembly factor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104055937 (PHAF1)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Other autophagy associated proteins
Others
104055937 (PHAF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
DUF1699
Motif
Other DBs
NCBI-GeneID:
104055937
NCBI-ProteinID:
XP_053935059
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All DBs
Position
13:21396691..21430949
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AA seq
427 aa
AA seq
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MLDLEVVPERSLGNEQWVVHLGLAGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLI
LNLTQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHP
GVYNSAEQLFHLNFRGLSFSFQLDSWTETPKYEPNFAHGLASLQIPHGATVKRMYIYNGN
SLQDTKAPLMPLSCFLGNVYAENVDVLRDGTGPSGLRLRLLTAGCGPGVLADAKMRVFER
CVYFGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILF
DANTHKVKKFVLHTNYPGHYNFNIYHRCEFKIPLVIKRDSADSQTENMSTYSKVMDSIQD
LLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPTRPSSQL
RTSDLPQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctagatctggaggtggtgcctgagcggtctctggggaacgagcaatgggtagttcac
cttgggctggctggaatgccattggctcaggctgtagcaattcttcagaaacactgtcgc
attatcaaaaacgtccaggttctctacagtgagcagtcgcctcttagccatgacctcatc
cttaacctaactcaggatggaatcaaactgctgttcgatgctttcaatcagagacttaag
gtgattgaagtttatgacttgactaaggtgaagttaaaatattgtggtgtccattttaac
tctcaggcaatcgctccaaccatcgaacaaattgatcagtcatttggagcaacacatcca
ggagtgtataattcagctgaacaactctttcacctcaatttcagaggactgtcattttct
tttcagttagactcctggactgaaactccaaagtatgagcctaactttgcccatggtcta
gcctctctgcaaattcctcatggtgcgactgtgaaacggatgtacatctacaatggaaac
agtctgcaggataccaaggctcccttgatgcccctcagctgtttccttggtaatgtgtat
gctgagaacgttgatgttctgagagatggaactggaccctcaggtttacggcttcgcctc
ctcactgcaggttgtggcccgggtgttttagctgatgccaagatgcgggtatttgagcgt
tgtgtgtactttggtgattcgtgccaggatgtgttgagcaccctggggtccccgcacaaa
gtcttctacaagtccgaagataagatgaaaatccattcgccctcaccccacaagcaggtc
ccatcaaagtgcaatgactacttcttcaactatttcacgcttggagtggatattctcttt
gatgcaaacactcacaaggtgaaaaaattcgtcctgcatacaaattatcctggtcattac
aactttaacatttaccatcgctgtgaattcaagattccactagtaattaagcgagatagt
gctgattcacaaactgaaaacatgtcaacatacagcaaggtaatggacagcatccaggat
cttctggggcaccctgtagaaaagccagtagtacttcacaggtcgtcatctccaaacaac
actaacccatttgggtcaaccttttgctttggactgcaacgaatgatctttgaggtgatg
cagaataatcacatagcttctgttactctgtatggcccaacgcgacccagcagccagttg
agaacgtcggaccttccccagtga
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