Cuculus canorus (common cuckoo): 104056162
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Entry
104056162 CDS
T08597
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104056162 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104056162 (SFPQ)
03041 Spliceosome [BR:
cuca03041
]
104056162 (SFPQ)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104056162 (SFPQ)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104056162 (SFPQ)
Spliceosome [BR:
cuca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104056162 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
104056162
NCBI-ProteinID:
XP_053942260
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All DBs
Position
22:7356666..7372765
Genome browser
AA seq
604 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRSPMAGGAQGPSGPPG
GGPKPEPPKPPASTSAPPSSSSSSSATTAGPAGSQAGAAPPSALPSGQQQPQPAGSAASS
APSGPGGQAQPKPSPSPTPAGGAKKGQGQSPGGGPKGPGGPGQGPHKGGPGHRGGPGGEP
RGRGQQQHHQGQQSLSSQQGSGGGGGEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNL
PADITDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRV
RFATHAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAA
RKAFERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPG
SFEFEYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQE
ELRRMEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMD
PRERDMRMGGATTMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMVK
MKAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcggttccgtagccgtggcggcggcggaggcggcttccaccgtcgaggc
ggcggcggcgggcgcggcggccccaaccacgatttccgctcgcctcctcccggtatgggt
atggggcagaaccgcagccccatggcgggcggcgcgcagggcccgagcggcccaccgggc
ggcggccccaagccggagcctcctaagccgccggcctccacctccgctccgccttcctcg
tcctcctcctcctccgccactaccgcggggcccgcgggcagccaggccggagccgccccg
ccctcggcgctgccctcggggcagcagcagccgcagcccgcggggtcggcggcctcctcg
gctccctccggtccgggcgggcaagcgcagcccaagccgagccccagccccacgcccgcg
ggcggcgctaagaaaggacaaggccagtcgccgggcggcggccccaaagggcccggaggg
cccggacaaggcccgcacaagggcggcccggggcaccgcggagggccgggcggggagccg
cggggccgcgggcagcagcagcaccaccaggggcagcagagcctgtcgtcgcagcaaggt
tcgggcggtggcggcggtgagaagttgtcggatgagggatttaaagcaaacctctctctc
ctgaggcgacccggggagaagacctacactcagcgttgccgcttgtttgttgggaatttg
cctgctgatataacagacgaagactttaaaagactgtttgccaaatatggggagccggga
gaggtttttatcaacaaggggaaaggctttggattcattaaattggaatctagagctctt
gcagaaatagcaaaagctgaactggatgatacccccatgaggggtcgtcagcttcgtgtt
cggtttgccacacatgctgctgcgctctcagtgcggaacctttccccttatgtctccaac
gagttactcgaggaagctttttcccaatttggtccagtggaaagagctgtcgtgattgta
gatgatcgaggtagatcaacaggaaaaggcattgttgaatttgcatcaaagccagccgca
aggaaagcatttgaacggtgtactgaaggagtgtttttgttgacaaccactcctaggcca
gttattgtggaaccattggaacaactggatgatgaagatggtcttccagaaaagcttgct
cagaagaatccgatgtatcaaaaggagagagagactcctccccgttttgctcagcctggc
agttttgaatttgaatattcccagaggtggaaatctttagatgaaatggaaaaacagcag
agagagcaagtggcaaaaaacatgaaagatgccaaggataaacttgaaagcgagatggaa
gatgcttatcacgagcatcaggcaaacctcttgcgtcaagaccttatgaggcgtcaggaa
gagctgaggcgtatggaagaactccataatcaagaaatgcagaagcgcaaggaaattcag
ctgaggcaggaggaggagcgtcgcaggcgggaagaggaaatgatgatacgtcagcgggag
atggaggaacaaatgagaagacagagggaagagaattatagtagaatgggatacatggat
ccaagggagagagacatgagaatgggtggtgccaccacgatgaacatgggagatccttat
gcttctgcagcccagaaatttccacctctcggaggtggtggcggcataggttatgaagct
aatccaggagttggccaagcagccatgagtggttctatgatgggaagtgacatggtgaag
atgaaagctgagtga
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