Cuculus canorus (common cuckoo): 104056172
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Entry
104056172 CDS
T08597
Symbol
BBX
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104056172 (BBX)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104056172 (BBX)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
PorA
Motif
Other DBs
NCBI-GeneID:
104056172
NCBI-ProteinID:
XP_053924588
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Position
1:complement(115238279..115393345)
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AA seq
896 aa
AA seq
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MKGSSRNKDHSTEGEGTGKRPKRKCLQWHPLLAKKLLDFSEEEEEEEEEEDIDKVPLLGT
DCLEQDADETEDDESSEQRARRPMNAFLLFCKRHRSLVRKEHPRLDNRGATKILADWWAV
LDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKAQASTITNRKKLWAFASDTAKD
LPSPRKMMKTEDMPQLNFGMADPTQMGGLSMLLLAGEHALTAQEVSSNACQSDATNSTEA
CQKSSLFQFAEISSSTSQPGVLGAVKQTEESALFQFAEISSNTSQLSSPEPVKHCGKSAL
FQLAEISSSTSHSGPSDLTKQCGTSALFQLAEMCLASEGVKMKEPGKTKVEAPQGVGKEV
PEEMEIEELEKATMKDSCKGKVEQTELEKMQNWDKSKAEESETAKCREFTSLAMERNPFE
RNDNIMDMYYSPEFSVADMNILGLKPEKIKKKKKKNKLDRHTNEKSTPKKPCKKRQSSES
DIESVMYTIEAVAKGDWGAERLGETLRKKPRPISNVKESVLDTKSPKKKVKSKEKKTSKE
KPPETTKESKPLDFLSITPSKEVPCEASDNIKVEPLTPTEDVVPQTLPEQVKTEDSDCVK
KIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEENWA
FSQSGTSGNKKLKKTKPKEEFVFGKNSSVPRKKRKIGSSSSEQPKSNKGSFQSQKKNFFY
KIVSKCKHRKKLNVPDTAILSEDRNSIESAWKNKISLSALNTPEPAMMHEPLVGSQKRKA
RKTKITHLVRTADGRVSPAGGTLEDKPKELPQSTPQKTSSSETDCNSECSRNAETEENHS
ITSDMPAVSAFFSLAALAEVAAMENVHRSQRATPLPHDGQPNEMSQAPVLISCADQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagtagtaggaataaggatcattcgacagaaggagaaggaactgggaagcga
ccaaaaagaaagtgtcttcagtggcaccccctgcttgccaagaaactccttgacttctct
gaagaggaggaggaggaagaagaggaggaagatattgataaggtgccactccttggtact
gactgtttagagcaggatgctgatgaaactgaagatgacgagtcctcagagcaacgggct
cgccgaccaatgaatgcatttctcttattctgcaaacgccatcgctctctcgtgcgaaaa
gaacaccctcgcctcgataatcgtggtgcaaccaagatcttggcagattggtgggctgtt
ctagatccaaaagaaaagcagaaatatactgacatggccaaggagtataaagatgcattt
atgaaggcaaacccaggctacaagtggtgcccagcaacaaacaaacctgtgaaagctcag
gcatccactattacaaacaggaaaaagctatgggcctttgcatcagacactgcgaaagat
ttgccaagtccaaggaaaatgatgaaaactgaagacatgccacagcttaactttggaatg
gcagatcctacacaaatgggaggcttaagtatgctgcttctagcaggggaacatgccctg
actgcacaagaggtttcctcaaatgcttgccaatctgatgcaactaattctacggaagcc
tgtcagaagtcatcattatttcagtttgcagagatctcttcaagcacctcacagcctgga
gtcctgggagctgtaaaacaaactgaagagtctgctttgtttcagtttgctgagatctca
tcaaatacttcccagttgtcaagtcctgagccagtaaagcactgtgggaagtcagcactt
ttccagttggcagagatttcttcaagtacatctcattcaggtccttctgatttaacaaaa
cagtgtggaacatcagcattatttcagctggcagagatgtgccttgcttcagaaggagta
aaaatgaaagaacctgggaaaacaaaagtggaagcaccacaaggtgtgggaaaggaagtt
ccagaggaaatggaaatagaagaactggagaaagcaacaatgaaagactcctgtaaagga
aaagtagaacaaacagagctagagaagatgcaaaactgggataagtcaaaagctgaggaa
tcagagactgcaaaatgcagagaatttactagtcttgcaatggagagaaatccttttgag
agaaatgataacataatggacatgtactattctccagagttttcagtggctgacatgaat
atcctcgggctaaagccagaaaagataaagaagaaaaagaaaaaaaataagttagaccgg
cacacaaatgaaaaatccacccccaagaagccttgtaaaaagaggcagtcctccgagtcg
gacattgaaagtgtaatgtatacaattgaagccgttgcaaagggggactggggtgctgag
agacttggagaaactctccgcaaaaaaccccgccctatctcaaatgtgaaggaaagtgtg
ttggatacaaaatcaccaaagaaaaaagtgaaatcgaaagagaagaagacatcaaaggag
aagcctccagagaccaccaaagaatcaaagcctcttgatttccttagtattacaccgagc
aaggaagtaccctgtgaggcttctgataacattaaagtggaaccactgaccccaacagag
gatgtggtaccccaaaccttaccagaacaggtcaaaactgaggacagtgactgtgttaaa
aagatagaaacctgtggctccaggaaatctgagagatcttgcaaaggtgctctttataaa
actctggtgtcagagggcatgctcacgtctctgcgtgctaacgtggacagaggaaaaaga
agctcaggaaaaggcaactcctcagatcatgaaggatgctggaatgaagaaaactgggct
ttttcccaaagtgggacaagtgggaacaaaaaactgaagaagactaagccaaaggaagag
tttgtttttgggaaaaattcatctgttccaaggaaaaagagaaagattggaagcagttca
tctgaacaaccaaaatccaataaaggttcattccagtctcagaaaaagaactttttctac
aaaattgtcagcaaatgtaagcacagaaagaagcttaatgttccggacacagccatactc
tcagaagacagaaattccattgagtctgcctggaagaataaaatttctctgtctgcccta
aacactccagagccagcaatgatgcatgagcctttagttggcagccagaagaggaaagca
aggaagactaagatcacacatcttgtccgaacagcagatggtcgggtgtcaccagcagga
gggacactggaagacaagccaaaagagctgccacaaagtactcctcaaaaaacgtcaagt
tcagaaactgattgcaacagtgaatgctccagaaacgcagagacagaagaaaatcatagt
attacatcagatatgccagcagtgtctgcattttttagcttagctgctctggcagaagta
gcagccatggaaaacgtacacagaagtcagagggccacacctctcccacatgacggacag
ccaaatgaaatgtctcaggctccagtgcttatttcctgcgctgaccagtga
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