Cuculus canorus (common cuckoo): 104056263
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Entry
104056263 CDS
T08597
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104056263 (LCMT2)
Enzymes [BR:
cuca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
104056263 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
104056263 (LCMT2)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104056263 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
104056263
NCBI-ProteinID:
XP_053928882
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Position
1:767901..791491
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AA seq
686 aa
AA seq
DB search
MGRERRSAQVQSTGGSSAVSKASAAARGYIQDRFLGLLAGPGRRRAPLVHRGYYIRARAV
DHCIQDFLQKTQSHPRTQILSLGAGFDSLFFRLKDLGLLRRTVVYEVDFPSVARRKAALI
RRTEELSALLGDIGGEGLGMASTEGFEGAVAGEGYRLLGVDLSELSHLEKALEEAGLDRG
VPTVVLAEVVLTYMETSRSDALIQWAAERFSQVCFLLYEQMHPEDPFGRVMQRHFRQLNS
ALRSLETYPEREDQERRFLQRGWSECSVVDMNEFFTTCTAEEEQRRVQALEPFDEYEEWH
LKCSHYFVLAASKGMEPPWTPLLPTLTGSPHHGPTRVVGSVPAAACASNPDSLGLRRYGH
RSVLLKPDVVLTTGGFGEDDGQHCRVRTFHVLVKREGGWRAGGVRQETPDTRWGERLYHT
ALCLSDDVVLLVGGRTSPSSSGVATVWLKVSGTSAEWDAAEVTVEPVDLPAVAEPPSHRW
RHSATQVTFQGENFLFLYGGRSATEPVLGDWCFLRIPELSYTVIPVEGAVPERRHSHGAC
AWEGGAVIVGGLGADEKPLGSLFLLRELQRGFGWQPMETHPPLVPRYSHTAHVHDGKLLL
VGGVWLRSSSVPGVTVVDLTTGLCLDYTIDVEPLEWPLMLHNHSSVLLPDEKELLVLGGG
GNCFSFGTHLNSEPVLLDLNSILTTP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggagcgccgctcggctcaggtgcagagcaccggtggcagcagcgccgtcagc
aaagcctcggcggcggccagggggtacatccaggaccggttcctggggctcctggcgggt
cctgggcgacggcgggcaccgctcgtccaccggggttactacatccgcgcccgcgccgtg
gatcactgcatccaagacttcctgcagaagacccaaagccacccgaggacgcagatcctg
tctctcggtgctggcttcgactccttgttcttccggttgaaggacctggggcttctacgt
cgcacggtggtctacgaggtggatttcccatcggtggcgcgccggaaagctgctctgatc
agaagaaccgaggagttgtcagcgctgcttggagatatcggaggcgaagggttgggtatg
gcatctacagaaggttttgaaggagccgttgccggtgagggttaccgactcctgggggtg
gatttatcggagctgtcccatctggaaaaggccctggaggaggcgggattggaccgtgga
gtccccaccgtcgtcctggccgaggtggtcctcacctacatggaaacgagcaggtcggac
gctctgatccaatgggcagcggagcgtttctcccaggtttgcttcctgctctacgagcag
atgcacccagaggaccccttcggccgcgttatgcagcgccatttccggcagttgaactcg
gctcttcgatcgttggagacgtatccggagcgtgaggatcaggagaggcgtttcctccag
aggggctggagcgagtgcagcgtggtggacatgaacgagttcttcaccacctgcacggca
gaagaagagcaacggagagtgcaggcgttggagcccttcgatgaatacgaggaatggcac
ctgaaatgttctcactacttcgtcttggctgcctccaaggggatggaacctccttggact
ccgctcttgcccacgctgacaggttctcctcaccatggtcccaccagggtggttggaagc
gtcccagcagccgcgtgtgcctccaaccccgacagcctcggcctgaggcgctacggccac
cgctccgttcttctgaaacccgacgtggtcctcaccaccggaggcttcggagaagacgat
ggacagcactgccgcgtgaggacattccacgtcctggtgaagagagagggtggttggaga
gccggtggggtgagacaggagacgccggacacgaggtggggggagcggttgtaccacacc
gcgttgtgtctctccgacgatgtggtcctcctggtgggaggtcgaacatctccctcgagc
tccggtgtggcaacggtgtggctgaaggtctccgggacctctgcggaatgggacgcggcg
gaggtgacggtggagcctgtggacctcccggcggtggctgagccgccttctcaccggtgg
agacacagcgcaacccaagtgaccttccaaggcgagaacttcctgttcctctacggtggt
cgctccgctacagagcccgtgttgggggattggtgtttcctgcgcattccagaactttcc
tacactgtgatcccggtggagggtgcggtgcccgaacgccgtcactcgcacggagcgtgt
gcttgggaaggaggagctgtgatcgtaggaggcctcggagccgacgagaagcccttgggg
tcactcttcctcctgagggagcttcaacgcggctttgggtggcaaccaatggagacgcac
cctcctctggtgccgagatattcccacacggcacacgtgcacgatggaaagcttctcctc
gttggcggagtgtggcttcgttcctcctccgtgccgggagtcaccgtcgttgacttaacg
accgggctctgcttggactacaccatcgatgtggagcccctggagtggccgttgatgctc
cacaaccacagcagtgttcttctgcccgatgagaaggagctgttggttcttggcggtggt
gggaactgcttctccttcgggacacacctcaactcagaacccgtcttgttggacctcaac
agcatcttaaccaccccttga
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