Cuculus canorus (common cuckoo): 104056338
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Entry
104056338 CDS
T08597
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104056338 (PWP1)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Other 90S particles
104056338 (PWP1)
Pre-60S particles
Other pre-60S particles
104056338 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD_LRWD1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF12
DUF6774
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
104056338
NCBI-ProteinID:
XP_053924965
LinkDB
All DBs
Position
1:complement(145938238..145957743)
Genome browser
AA seq
494 aa
AA seq
DB search
MSCPVTCAAWVRCGVAKETPDKVQLSEEELNRLIEESQARRGDGTDDSDEGQMANDTNEP
VPGRDESSHKNEDLSDDELGEYDLENYDEEECTGDLKLGDSLATLAVHGSNEHDPYITLK
TTEQYEQEDFMIKPTDNLVLCGRVDKDYCSLEVHVYNHEEDSFYVHHDIILPAYPLSLEW
LNFDPSPDESPGNYVAVGNMTPVIDIWDLDVVESLEPVFSLGGKKDKKKKNKGKQSLSSE
GTVKGHTDAVLDLSWNRQSRNVLASASADSAVILWDMAVGKPAASLMQHTDKVQTLQFHP
FETQTLVSGSYDKSAVLYDCRNPQDNHRIWRFSGQVERVTWNHFSPCNFLASTEDGFVYC
LDARADKPLFTLKAHDEEVSGLQLSSQIKGCLVTSSADKYVKIWDILGDKPSLIHSRNMK
MGVLFCAACCPDFPFVFAFGGERQGLRVWDISKISAVNEAFGNRERLVLADANTAACGST
AGSSSNDSETAMES
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccccgtgacttgcgcggcctgggtgcgctgcggcgtcgccaaggaaacgccg
gataaggtgcagctcagcgaggaggagttgaaccgtctcatcgaggagtcccaggcgagg
cggggagatggcactgatgatagtgatgaaggccagatggcaaatgacacaaatgaaccc
gttcctggcagagatgaatcttctcataaaaatgaagacctgtctgatgatgaactgggt
gaatatgatttggaaaattatgatgaagaagaatgcacaggtgacctaaagcttggagac
tctttggctactctggcagtacatggaagtaatgagcatgatccttacatcactctaaaa
accaccgaacaatatgaacaggaggactttatgattaagcccactgacaatcttgtcctt
tgtggcagagttgataaggactactgtagtttggaggtccatgtttataaccatgaagag
gactcattttatgtacatcatgatattatcttgcctgcttaccctctaagtctggagtgg
ttgaattttgatcctagtcctgatgaatcaccaggaaattatgttgcagtgggtaacatg
accccggttattgacatttgggaccttgatgtagtagaatccttagaaccagttttttcc
cttggaggcaagaaagacaaaaagaagaaaaataaaggaaagcaaagtttatcttcagaa
gggacagtgaaaggacatactgatgctgtgcttgatctttcatggaatagacaaagcagg
aatgttttagcaagtgcgtctgctgacagtgctgtgattttgtgggatatggctgtgggt
aagccagcagccagcctgatgcaacatacagacaaggtccagacattgcaatttcatcca
tttgaaactcagacccttgtttctggatcttatgataaatcagctgtgctgtatgattgc
agaaacccacaagataaccatcgaatatggcggtttagcggtcaggttgaaagagtaacc
tggaatcatttttcaccttgtaatttcttagcaagcacagaagatggctttgtgtactgt
ctggatgctcgtgctgataagccactgtttaccctgaaagctcacgatgaggaggtttca
ggactacaacttagcagtcagatcaaaggttgccttgtgacatcatctgctgacaaatac
gtgaaaatttgggacatcctgggagacaaaccaagtttaatccattccaggaacatgaaa
atgggggttctcttctgtgctgcttgctgccccgacttcccatttgtttttgcgtttgga
ggagagcgacaagggctccgtgtttgggatataagcaagatttctgcagtgaatgaagct
tttggaaacagagagagacttgtcctggctgatgccaacactgcggcttgcggctccaca
gccggcagtagcagcaatgattcggagacagcaatggaatcatga
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