Cuculus canorus (common cuckoo): 104056340
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Entry
104056340 CDS
T08597
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104056340 (PRDM4)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104056340 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
104056340
NCBI-ProteinID:
XP_009555884
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRPPPQY
IHPNTMNVDSNPALSVSSNPSALDPYQPSGTVGLEPGIVSMDSRAVNTHGAQNLHPSDSH
DVALDTTITMESVSRVTSPISTDGMTEELTMDDVAGDHSQIPNGSQSHEPLAVDTVGSNL
TSDAVGHGGVIPIHGSTLELPVVMEPDHIAGRVTGISDSTLNDSIHTVAMSTNSVSVALS
TSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPSHVDVSADNLAFVPSSLQMEDSNS
NKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSIMGAE
MGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKVASHIWKIYHNGVLEFCVITADENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYARQLGVPDHPDV
HMCHCGKECASYADFKAHLSSHIHNHLPSQGHSSSHGAGHGRERKWKCSMCPQAFISPSK
LHIHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESH
MVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQEQQIKCPKCDKLFLRTNHLKKHLNSH
EGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELIDSMRTEDCR
INNGVYSTGDALPGRK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgaacttgagtcctgtagggatggaccagctgacctcatcctctgtgagc
aatgctttgcctgtctcggggagtcacttgggattggcagcatcacccactcacaatgcc
ataccagcaccaggcttgcctgttgcaattccaaacctgggcccctccttgagttccttg
ccctctgctctgtctctgatgctcccaatgggtattggggatcgaggagtgatgtgtggt
ataccagagagaaactacaccctacctccgccaccataccctcacctggagagcagctat
ttcaggcacattctacctggtatcttatcctacttggctgacagacctccacctcagtac
atccatcccaacactatgaatgttgatagcaatccggcgttgtcagtctccagcaatccc
tcggccctagatccctaccagcccagtggaaccgtggggctggaaccagggattgtctcc
atggactcccgtgcagtgaacacacatggtgctcaaaatctgcaccctagtgacagccac
gatgtagcactagatactacaatcactatggagagcgtttcaagagtaaccagccccatc
tctactgatgggatgacagaggagcttacgatggatgacgtagccggggatcattcacag
atcccaaatggctcccagagccatgaacctttagccgtagacacggtggggagtaacttg
acgtcggatgccgtgggacatggcggtgtcattcccattcatggtagcactttggaactc
cctgttgtcatggagcctgaccacatcgctgggcgggtgacaggaatatcggacagcaca
ctaaatgattccattcatactgtggccatgagcaccaactctgtgagtgtggcgctctct
acctcacacaacctggcttccctggactcagtagccttgcatgaagtaggcctcagcctc
gagccggtggcagtgtcttccataaatcaggaagtagccatggggccaagtcatgtggat
gtgtctgcagacaatcttgcctttgtaccatcctctctgcaaatggaagactccaactca
aacaaggaaaacatggcaaccttgtttaccatatggtgcacactgtgtgacaaggcgtat
ccatcggactgcccagatcatgggcctgtcacctttgtccctgacaccccaatagagagc
cgagccaggctttctctccccaagcagcttgtcctccggcagtctatcatgggagctgaa
atgggtgtgtggacacgagaaaccattcctgtaagaacttgttttggacctttgattggg
cagcagagccattctctggaggtggctgactggacagacaaagtggctagtcacatctgg
aagatctatcacaatggtgtcctggagttctgcgtcattacagctgatgaaaatgaatgt
aactggatgatgtttgtacgcaaagccaggaaccgggaagagcagaatctagtagcttat
cctcacgatggaaaaatttacttttgcacctctcgggacatcccacctgaacatgagctt
ctcttctattacagtcgggactatgcacgacagcttggtgtccctgaccatccggacgtg
cacatgtgccactgcggaaaggaatgtgcttcctatgcagacttcaaggcccatttgagc
agccatattcacaaccacctccccagtcaggggcacagcagcagccatggggcaggccat
ggcagggaaaggaagtggaagtgctccatgtgcccccaggctttcatctccccttccaag
ctccacatccacttcatggggcacatgggcatgaagccgcacaagtgcgatttctgtagc
aaagctttcagtgatcctagcaacttacggacacacctcaagatacacacaggtcagaag
aattatcgctgtaccctctgcgacaaatcgttcacccagaaggctcatctggaatcgcac
atggtcatccacacaggggagaagaatctgaagtgtgattactgtgaaaagctgttcatg
cggaggcaggacctcaagcagcatgtactcactcacacgcaagaacagcagatcaagtgc
cccaagtgtgacaagctgttcctgaggacaaatcacctgaagaagcatctcaattcacat
gaaggaaaaagggactatgtctgtgaaaaatgctccaaggcttatctaaccaaatatcac
ctcactcgccacttaaaaatatgtaaaggccctacatccagcctgtcagccccagaggag
gaagaggaggaagattcagaggaggaattaatagactctatgaggactgaagactgtagg
attaacaatggagtgtattcaacaggtgatgccctccctggacgtaaatga
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