Cuculus canorus (common cuckoo): 104056347
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Entry
104056347 CDS
T08597
Symbol
FGD4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104056347 (FGD4)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
104056347 (FGD4)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
FYVE_2
RHG20_PH
PH_2
zf-RING_UBOX
DUF4162
PH_11
zf-RING_5
Presenilin
PH_16
Motif
Other DBs
NCBI-GeneID:
104056347
NCBI-ProteinID:
XP_053936418
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Position
1:144948528..144990889
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AA seq
757 aa
AA seq
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MEEETPTPVSGVAKEKSSKVSDLINRFEGGSFSPLNPSDLKKDSSLLHISKSQGRYGSTP
PPQPKLPCQHPLQNQGNSNTDKTQVAQLHTANGVVAQDQTEDEDRSLSDRGSTVSTPVPD
NAINSSLINGERESTSRESLQSETACEGQMLNSCCRSPSSDTLLLSENETLATNANVKEE
PNEEISKQDQPVETKETDEQKRHKIASELLQTEKAYVSRLDLLDGVFYSRLLEEANRGSF
PAEVINKIFSNISSINAFHSKFLLPELEKRMQEWTTTPRIGDILQKLAPFLKMYGEYVKN
FDNAMELVKTWTERSPQFKFIVQDIQKEKVCGNLTLQHHMLEPVQRIPRYEMLLKDYLRK
LPQDSLDWKDAEKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIK
EGQILKLAARNTSAQERYLFLFNNMLLYCVPKFSLVGSKFSVRTRVGIDGMKIKETHNEE
YPHTFQVSGKERTLELQASSEQDKEEWIKALQNTIEAFQQRNETFRNAIAKEYEDLPVEV
SNAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAHLEYDG
NKLNKVCKDCYHVIIGCTDSEEKKKKGILEIESAEVSGNSVICSFLQYMEKSKPWQKAWC
VIPKQEALVLYMYGAPQDVKALATIPLLGYTVDDTPRSADLPHSFKLTQSKSVHSFAADN
EELKQKWLKVIHLAVKGETPECQNELQVNLEEQPESS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagacacccacccctgtttctggtgttgcaaaggaaaagtccagtaaagtg
tcagatctcatcaatcgttttgagggaggcagttttagcccattaaatcctagtgatttg
aagaaagattcctctcttctccatatttctaaatctcaaggaagatatgggtcaacacca
ccacctcagccaaaactcccctgccagcacccactacaaaaccagggaaacagtaatacc
gacaaaactcaggttgcacagctgcacacagccaacggagtagtagcacaagaccagaca
gaagatgaagacaggagtttatctgaccgtggctccactgtgtccaccccggttccagat
aatgccatcaacagcagcttgataaacggggaaagagaaagtacctccagagagtcactg
caaagtgagacagcttgtgaaggacagatgcttaacagctgctgcaggtctccaagcagt
gatacactgctcctgtctgaaaatgaaactctagcaactaatgctaatgtgaaggaagaa
ccaaatgaggaaatcagcaaacaagatcaacctgtagaaacaaaggagacagatgaacag
aaacgtcacaaaattgccagtgaacttctgcagacagaaaaagcctacgttagccgactt
gatctcctagatggggtattctattccagacttcttgaagaggccaacagaggttcattt
ccagctgaagtgattaacaaaatattttcaaatatttcgtcgataaatgccttccacagt
aaattcttacttccagaacttgagaaaagaatgcaagaatggactaccacccccagaatt
ggagatattctgcaaaagttagctcctttccttaagatgtatggggagtatgtgaagaat
tttgataatgcaatggaattggtgaaaacatggactgaacgatcacctcaattcaagttc
attgttcaggacattcagaaggaaaaagtgtgtggaaatttgacattgcaacatcacatg
ctagaaccagtacaacgcattccacgctacgagatgcttctaaaggactacctaaggaaa
ttgcctcaggattccctagactggaaagatgctgaaaaatccctggaaatcatatctact
gcagcaagtcactctaatagtgcaataagaaaaatggagaatctaaagaaattgttagaa
atctatgagatgctgggagaagaggaagatattgtgaacccttcaaatgaactgataaaa
gaaggacagatccttaaacttgctgctcgcaatacgtctgctcaagaacggtatcttttt
ctatttaacaatatgttgctctactgcgtccccaaattcagcttggtgggatcaaagttc
tcggttcgaaccagagttggcatagatggtatgaagattaaggaaactcataatgaagaa
tatccacacacttttcaagtgtctggaaaagaacgaacactggagttgcaggccagttct
gaacaagataaggaagaatggataaaggcgcttcagaatactatagaagcttttcagcag
aggaatgaaactttcagaaatgctattgcaaaggaatatgaagacttgcctgttgaggtt
tctaatgctgagcttgggaagagagcaccaaggtggataagagacaacgaagtaaccatg
tgcatgaaatgcaaggagccctttaatgcactgacaaggagaaggcaccactgcagagca
tgtggacatgtggtttgctggaaatgttctgattataaggcacatcttgaatatgatggc
aataaattgaacaaagtctgtaaagactgctatcacgttataattggttgtacagacagc
gaagaaaagaagaagaaaggcatcttggaaattgaatctgcagaagtctctggaaatagc
gtcatatgtagctttcttcagtacatggaaaaatcaaagccctggcagaaagcgtggtgt
gttatacctaaacaggaagctcttgtgctgtacatgtatggcgctccacaggatgttaaa
gctctggctacaattccacttctgggctatacagtagatgatactccaagaagtgctgac
ctcccacacagcttcaaactgacccagtctaagtctgtgcacagttttgctgcggacaat
gaggaactaaaacagaaatggctaaaagttatccatttagctgtcaaaggtgagacacca
gaatgtcaaaatgaactgcaagtaaatttagaagagcaacctgaatcttcttaa
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