Cuculus canorus (common cuckoo): 104056701
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Entry
104056701 CDS
T08597
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104056701 (AFF3)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104056701 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
MACPF
Motif
Other DBs
NCBI-GeneID:
104056701
NCBI-ProteinID:
XP_053943662
LinkDB
All DBs
Position
1:67743957..68072564
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AA seq
1240 aa
AA seq
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MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGTFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTPLPKPDEHLIADSRPPP
PPPVSSTTTSTPAALPAQQSKSTTMVWQKAGHNAASDSQQRVSKHGHRSLESHKGDFKLA
NQKTSLEKLKRYASSPISSSSNTAQQSSLRGTLGENVNRVQQPAKLNCSSEGGAQVQERP
AKHSGGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSYRGV
PSNKPDSARTKSKIAKFSIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGKAEQ
NKFAFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHTSMLEDDLKLSSDEEENDQQAAQR
SALRVLSDSSLVVPQSNARASGLSSKGSSSSSSSESETSSESDSESESSSSESDGSKPSH
YSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDSPALEPHPYYGVVKAERQESEKTPV
ASPVEHHSGESRTTATTIVGDRPRPRTANKAPGSKGGRQKSPPAADSGPPRRAAGKKVPR
RVERTSAGDSPHCHGTEEPPGSHSFPESTAGEATRARPGSSGGSSGSSSGGCRAGHRREP
RSATASEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSELEQEDRPLPKAQAVAGAEP
RTKDTGTSAASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFGRNELLSPLKDSDEV
KSLWVNIDLALLSRIPERLPEEPLVMSAGANQAASLPQGNSADPPTEKGLPKSRRKRKCE
NEEECKDIKKTHLERENSSRLAASAHSITTANHCNMNENSLAIPINKNEKMLRSPVSPLS
DASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKAEIQSQPHPGDFNKAIHINTENFLLC
NKPQSQTEPWSPLSSTPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALN
YAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAAL
CYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGASGKSTGTPSPMSPS
PSPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENR
DFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctccttcaggagtgggacctggactctctgtgtgtctat
gagcctgacagaaacgtgctgcgaaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcacatttaacacgagttactccctcttcagtgaaccgtacaagactaac
aagggagatgagctctcgaaccgcatccagaatacgctgggtaactatgatgaaatgaaa
gacttgttaactgacagatcaaatcagagccaccttgttggggttccgaaacctggggtt
cctcagacgcctctccccaagcctgatgaacatcttattgcagactcaagaccaccacct
cctcctcctgtttccagcactactacttctacaccagcagccctacctgcccagcagagc
aaaagcaccacaatggtttggcagaaggccgggcataatgctgcttcagacagccagcag
cgagtgagcaagcatggacaccgttcgctggagtcacacaaaggtgacttcaaactggca
aaccaaaaaaccagtctagagaaactaaaacgctatgcatcaagtcccatctcctcctcc
tccaacactgcccagcaaagctcactgaggggcacactgggagaaaatgtcaacagagtg
cagcagccagcaaaactcaattgcagctcagaaggaggagcccaagtgcaagagaggcca
gcaaagcatagtggtgggcactgcgtccaaaacttcccaccctcacttgcttcaaagccc
agtctggttcagcagaaaccaacagcttatgtaaggccaatggacggtcaagaccaggct
cctgatgagtctccaaagctgaagttaccagcagagacaaccaagtcatataggggagtg
ccttctaacaagccagattcagccaggaccaagtcaaagatagccaagttcagcatccct
aagcaagaagaggacagtggaacaggagataacagctgcattgaagaaatattgcgggag
atgacccattcctggcctccaccactgtcagctattcacacaccaggaaaagcagaacaa
aacaagtttgcctttccaaacaaggagtcacaacagggatctacaggacacagcaataca
aggaaaagtgatgtagagccaaagagtccagagaaaagcgcaacccatacatcaatgcta
gaagatgacctcaagttaagcagtgatgaagaagagaatgaccagcaggcagcacagaga
tctgctctccgcgttctatctgacagcagcctggtggtgccgcagtccaatgctcgagcc
tcaggactctccagcaaggggtcgagcagcagcagctccagtgaatccgagaccagctca
gagtctgattcagagagcgaaagcagctccagcgagagtgacggcagcaagccctcacat
tactccagcccagagcctgagccaccctcatccaacaagtggcagctggacaagtggcta
aataaagtcaccccgcacaaagcacccatcctgacccaccatgacagcccagcactagag
cctcatccctactacggagtcgtgaaggcagagcgtcaggaaagtgagaagaccccagtt
gccagcccagttgagcaccacagtggagagagccgcaccactgccaccaccatcgttggg
gacagaccacgacccaggactgccaacaaagcaccaggcagcaaaggtggccggcaaaag
tcaccacctgctgccgacagtgggcctccaaggcgggcagcagggaagaaggtaccgcgg
cgggtcgagaggacgtctgctggggacagcccccactgccacgggacagaggagccccct
gggagccacagctttccagaaagtactgctggcgaggcaacgagggcacggcccggcagc
agtggcggcagcagtggcagcagcagtggtggatgcagagcagggcatcgccgggagccc
cgctcagccacagccagcgagaaacgtcgggctagggggccaagcaaaacggcacccaaa
tccaaggagttcatcgagactgaatcttcatcctcatcatcctcctccgactcgggttct
gagttggagcaggaggatcgcccgctgcccaaggcgcaggcagtggctggtgctgagcca
cgcaccaaggacacggggaccagcgccgctagcaaaccccacggcggctgcagtgccttt
ggctccattaatgccaggactagtagtgaaatagcaaaggagctggaggaacagttttac
accctggttcctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggta
aagtcactgtgggtcaacattgacttggctcttttgtccaggattccagagcgtttgcct
gaagagccgctggtcatgagtgctggagcaaaccaggcggccagcctcccgcagggtaat
agtgctgaccccccaacagagaagggtttaccgaaatctagaaggaaacgcaagtgtgag
aatgaggaagagtgcaaagacatcaagaagactcacttagagcgagagaattcttcacga
ttagctgcctctgcccacagcatcacaacagcaaatcactgcaatatgaatgaaaacagc
ttggcaataccaataaataaaaatgagaaaatgcttcggtcacccgtctctcccctctct
gatgcatcaaaacacaaatactccaacgatgatttaacttcctccagcagacctaatggc
agcagtctattaccttccatctcctccagcaaaaaacataaggctgaaatccagtcacag
ccacatcctggagacttcaataaagcaattcacataaatacagaaaactttcttctctgc
aataagccacagtcccaaacagaaccttggtcacctctgtccagcacacccagggactgc
agaaggacaaagcttatctttgatgatatgccacgcaatgcagattactttatgcaggaa
gctaaacggaagaaacataaagcagatgcaatggtggaaaagtttggaaaggcactgaat
tatgcagaagcagcactatcgtttattgaatgtggaaatgcaatggagcaaggcccaatg
gaatctaaatccccttacacaatgtattcagaaacagttgaactcatcaggtatgcagtg
agactaaaaacccactcaggccccaacgccactccagaagacaaacagctggcagcatta
tgttaccgctgcctggcccttctgtactggaggatgtttcgactcaagagagaccacgca
gtcaagtattcaaaagcgcttattgagtatttcaagaattcgtcaaaagctgcccagaac
ccatctccttggggtgccagtggaaagagcacaggaactccatcacccatgtcccctagc
ccttctccagtcagctctgtaggatcccaggggagcacaggggccccttccccatctcct
atcatcagcatcccgcagcgcattcatcagatggctgccaaccacgtcagcatcaccaac
agcatcctgcacagctatgactactgggagatggctgacaacctggccaaggaaaacaga
gatttttttaatgacctggatgcattgatgggacctatcaccttgcacagcagtatggag
catttagttcagtacactcaacaaggacttcactgggtgaggaatagcgctcacttgtca
taa
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integrated database retrieval system
