Cuculus canorus (common cuckoo): 104056715
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Entry
104056715 CDS
T08597
Symbol
UBR5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104056715 (UBR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104056715 (UBR5)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104056715 (UBR5)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
HECT type E3
104056715 (UBR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
104056715
NCBI-ProteinID:
XP_053914498
LinkDB
All DBs
Position
2:22578020..22666022
Genome browser
AA seq
2798 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFSVQPDRLELGKPDNNDGSKLSSGSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSIIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLGEDL
QWWPDKDGTKFISIGALYSELVAVSSKGELYQWKWSESEPYRNAQNPSLHHPRAMFLGLT
NEKIVLLSANSIRATVATENNKVATWVDETLSSVASKLEHAAQTYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKSMEKASKTTEAKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSSNANCQSSSNSDPDPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSIAFLGQNERSVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLTNLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMNLEHAVV
LDQNPQMLQTFLGHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVE
AIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGTSSSDHQDPVSPP
IAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTAATGTGQGPSTSTIPGPSTEPSVVESKD
RKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKIA
KAEATSSEKEDDVFMGMVCPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLT
TTNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANPEDSDMPDHDLE
PPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRL
DCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAIAVTMRFLRSVARVFVILS
VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIIPVRMGIARPTAPFTLA
STSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQSQSSYIIRNPQQRRISQSQPVRGRDEE
QDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAA
ETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQ
SDDIEQETFMLDEPLERTTNSSHANGAAQAPRSMQWAVRNTQNQRTTSTAPSSTSAPAAS
SAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMG
LIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALA
SAGDPGHPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNY
ALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTREL
LELGLDNEDSEHENDDDTNQSATLNDKDDDSLPAETGQNHPFFRRSDSMTFLGCIPPNPF
EVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSANSGKCLMEVTVDRNCLEVLPT
KMSYAANLKNVMSMQNRQKKEGEEQNVPVEESENSKPGPSAHDLAAQLKSSLLAEIGLTE
SEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEV
KESKFRREMEKLRNQQSRDLTLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVT
FKDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTSLMQRLRNRGERDRER
EREREMRRSSGLRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPGDDPDPLPAHRQALGER
LYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADS
ILDLGLLDSSDKVQENRKRHGSSRSVVDMELDDTDDGDDNAPLFYQPGKRGFYTPRPGKN
TEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQ
LILASQSTDADAVFAAMDLAFAIDLCKEEGGGQVELISNGVNIPVTPQNVYEYVRKYAEH
RMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESG
ENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQH
LPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgatccacttcgtggtgcacccgctgccgggcaccgaggaccagctcaatgac
cgattaagggaagtttcagagaagctgaacaaatataatttaaacagccacccccctttg
aatgtattggaacaggccactatcaaacagtgtgtggtgggaccaaatcatgctgcattt
cttcttgaggatggtagagtctgcaggattggtttttcagttcaaccagacagattggaa
ttgggtaaacctgataataatgatggttcaaagttgagcagtggctcaggggcaggaagg
acatccaggccaggcaggactagtgactccccatggtttctgtctggttctgaaactctg
ggcagactggcaggcaacacccttggaagtcgctggagttcaggggtcggtggaagtgga
ggaggatcttctggtagatcatctgctggagctcgagattctcgaaggcagaccagagtt
atacgcacgggacgtgatagaggatctggactgctggggagtcagccacagccagtgatt
ccagcatcagtcattccagaggaactcatttcacaggcacaagttgttttacaaggaaag
tccagaagtattattattcgggaactccagcgaacaaatcttgatgtaaatcttgctgta
aataatttgttgagtcgtgacgatgaagatggagatgatggggatgacacagcaagtgaa
tcatatcttcctggagaggatcttatgtctcttctggatgctgacatacattctgctcac
ccaagtgtcattattgatgctgatgctatgttttcagaagatattagttactttggttat
ccatcctttcggcgctcatcactttccaggctaggctcatccagagttctccttcttccc
ttagagagagactctgaactgttgcgtgaacgtgagtccgttttacgtttgcgtgaacga
aggtggcttgatggagcctcatttgataatgaaagaggctctacaagtaaggaaggggaa
ccaaacctggacaagaagaatacacctgttcaaagtcctgtttctttaggagaagacttg
cagtggtggccagataaggatggaacaaagtttatttctattggagctctgtattctgag
ctcgtggctgttagcagtaagggagaactttatcagtggaagtggagtgaatcagaacct
tacagaaatgcacagaatccatcgctacatcacccacgagccatgttcttgggattaacc
aatgaaaagatagtgcttctttctgcaaatagtattagagcaactgttgccactgaaaat
aacaaggttgctacatgggtagatgaaactttaagctccgtagcttctaaattagaacat
gctgcgcagacgtactcggagcttcagggagaacgcattgtttctttacattgttgtgct
ctttatacatgtgctcaactagagaacaacttgtattggtggggtgttgttcctttcagc
caaaggaagaaaatgctagaaaaggccagagcgaaaaataaaaagccgaaatctagtgct
ggtatctcctctatgccaaacataaccgttggaacccaggtgtgtttaagaaataatccc
ctctatcatgctggagcagttgctttttcaatcagtgctggaattcccaaagtaggtgtg
ttaatggaatctgtttggaacatgaatgatagctgtcgatttcagcttcggtcacccgag
agcttgaaaagcatggagaaagctagcaaaactacagaggcaaaacctgaaagcaaacag
gaaccggtgaaaactgagatgggtcctccgccatccccagcatccacttgtagtgatgca
tcttcaatagcaagcagtgcatcaatgccgtataagcgacgacgatctactcctgcccca
aaagaggaggaaaaagtgaatgaagagcagtggtctctgagggaagttgtttttgtggaa
gacgttaagaacgttcctgttggcaaggtgctaaaagtggatggtgcttatgttgctgtg
aaatttccaggcacctccagtaatgcgaactgccagagcagttctaattcagatcctgat
ccttcttctcttcttcaagactgtaggcttctcagaatagatgaactgcaggttgtaaaa
actggtggaactccaaaagttcctgactgttttcaaaggacacctaaaaagctgtgcatt
cctgaaaaaacagagatcctagcagtaaatgtagattccaaaggagtgcatgctgttctg
aaaactgggaactgggttcgatactgcatatttgaccttgccacaggaaaagctgaacaa
gaaaataatttcccaactagcagcattgcattcctgggtcagaatgagagaagtgttgct
atttttacagctggacaggaatctcctattattcttagagatggaaatggtacaatctat
ccaatggcaaaagattgtatgggtgggatacgagaccctgactggcttgatcttccacct
attagtagtcttggaatgggtgttcattccttaacaaatcttcctgctaactcaaccatc
aaaaagaaagctgctattatcattatggctgttgagaaacaaaccttaatgcagcacatc
ctccgatgtgactatgaggcttgcagacagtacctgatgaatcttgaacacgcagttgtc
ttggatcagaatccacaaatgctgcagacattccttggccatagatgtgatggaaaccgt
aatattctgcatgcttgtgtgtctgtatgctttccaaccagcaacaaagaaactaaagag
gaagaggaagcagagcgctctgaaaggaatacatttgctgaacggctctcagctgtggaa
gctattgcaaatgcaatctctgttgtgtcaagtaatggtccaggaaatcgggcaggatca
tcaagcagcagaagtttgaggttaagggaaatgatgagaagatccttgagagctgctggg
ctgggcagacatgaagctggtacttcatcaagtgatcatcaggacccggtttctccaccg
atagctcctcccagctgggttccagatcctcctgcaatggatccggatggtgacattgat
tttatcctggcccccgctgtgggatctcttaccacagcagcgactggcaccggccaagga
cctagcacctccacaataccaggtccttctactgaaccatctgtagtcgaatcaaaggat
cgaaaggcaaatgctcatttcatactgaaattactatgtgatagtgttgttttacaacct
tatcttcgagaattgctgtcagccaaggatgcaagaggcatgacaccatttatgtcggca
gttagtggccgggcgtatcctgctgcaattacaattctagaaactgcacagaaaattgct
aaagctgaagcaacttcaagtgaaaaagaagatgatgtgttcatgggaatggtttgtcct
tctggtacaaatccagatgactctcctttgtatgttttgtgttgtaatgatacatgcagt
tttacatggactggagcagaacatattaaccaagatatatttgaatgccgaacatgtggc
ctattggaatcgctttgttgttgcacagaatgtgcaagggtctgtcacaaaggacatgat
tgcaagctcaaacgaacatctccaacagcctactgtgattgctgggaaaagtgcaagtgt
aaaacactaattgctggacaaaagtctgctcgccttgatctcctttaccgcctgcttaca
accacaaatcttgtgaccatgccaaatagcagaggagaacatcttctgctgtttttagta
cagacagttgccaggcaaaccgtggaacactgccagtacagaccacctagaattagggaa
gatcgtaatcgtaaaactgcaaatcctgaagattctgatatgcctgatcatgatttagaa
cctcctcgatttgctcagcttgctttggaacgtgttttgcaagactggaatgcactgaag
tccatgataatgtttggctcccaggagaataaagaccctcttagtgcaagcagtaggata
ggtcatcttctgcctgaagaacaagtttaccttaatcagcaaagtggaactattcgcttg
gactgtttcacacactgccttattgtcaagtgtacagcagacattttgctcttagatact
ttgctgggtactctggtaaaggaattacaaaacaagtatacgcctggacgcagggaagaa
gctattgctgttacaatgagattcctgcgttctgtggcaagagtgtttgtcattcttagt
gtggaaatggcttcctccaaaaagaaaaacaattttattccacagccaattggaaaatgt
aaacgtgtattccaggcactattgccctatgcggttgaagagttgtgcaatgtagcagaa
tctttaattattccagtcaggatgggaattgcacgtcctactgcaccgtttactctcgct
agcactagtatagatgccatgcaagggagtgaagaactcttttctgtggagcctctgcca
cctagaccatcatctgaccagtctagcagttctagtcaatctcagtcatcctacatcata
aggaatcctcagcaaagacgaatcagccagtcacagcctgttcgtggcagggatgaagaa
caagatgatatcgtttcagcagatgtggaagaggttgaggtagttgagggggtagctggt
gaagaagatcatcacgatgagcaagaagagcatggtgaagaaaatgctgaagcagaagga
cagcatgacgaacatgatgaagatggcagtgatatggagttggatttgctagctgctgct
gaaacagaaagtgacagtgagagtaaccacagtaatcaggacaatgctagtgggcgcaga
agtgttgtcactgcagctactgctgggtcagaagcaggagctagcagtgttccagcattt
ttttctgaagatgactctcaatcaaatgattccagtgattctgatagcagcagcagtcag
agtgatgacatagagcaggagaccttcatgcttgatgagcctctggaacgaaccacaaat
agctcacatgccaatggtgctgcccaagctccccgttccatgcagtgggctgtacgtaac
acccaaaaccagaggaccactagcactgctccttctagtacgtcagccccagcagcaagt
tcagcgggcttgatttacattgatccatcaaacctacgtcggagtggtaccatcagtacg
agtgctgcagcagcagctgcagcacttgaagccagcaatgcgagcagctatttaacatct
gcaagcagtttagcaagagcatacagtattgtgatacgacagatatctgatctgatgggt
ctgattcccaagtacaatcacttagtatactctcagatcccagctgcagtgaagctgact
tatcaagatgcagttaacttgcagaactacgtggaagaaaagcttattcctacttggaat
tggatggttagtatcatggactctactgaagctcagctgcgttatggttctgcgttagct
tctgctggtgatcctgggcatccaaaccatcctctccatgcttctcagaactcagccagg
agggaaaggatgacagcccgtgaggaagctagcttaagaacactcgagggaagaagacgc
gctactctactcagtgcccgtcagggaatgatgtcagctcgtggtgatttcctgaactac
gcgctgtctttgatgcgttcccacaatgatgagcactcagatgttcttcctgttctagat
gtctgttcactaaagcacgtagcatatgtttttcaagcccttatttattggattaaagca
atgaatcaacagacaacattggatactcctcagctggaacggaaaagaactcgggagctt
ctagaactgggtcttgacaatgaagattcagaacatgaaaatgatgatgataccaatcaa
agtgctacactcaatgacaaagatgatgactccctcccggcagagactggccaaaaccat
ccgtttttcagacgatcagattctatgaccttccttggctgcattccacctaatcctttt
gaggttcctctggcagaagccatcccgctggcagaccagccccatctgttacagccaaat
gctcgcaaagaagatctgtttggccgaccaagccagggtctgtattcatcctctgccaac
agcgggaagtgcttaatggaggttacagtggatagaaactgccttgaggttcttccaact
aaaatgtcctatgcagccaacttgaaaaatgttatgagcatgcaaaatcggcaaaagaag
gaaggggaggaacaaaacgtgcctgtagaagaatctgagaattcaaagccagggccttca
gctcatgatcttgcagcacaactgaaaagcagcttgttggcagagataggattgacagaa
agtgaaggaccgcctctcacatctttcaggccacagtgtagcttcatgggcatggttata
tctcatgacatgctgctgggacgttggcgcctttctttagagttgtttggtagagtattc
atggaagatgttggagcagagcctggatcgatcttgactgaattaggtggctttgaagta
aaggaatcaaaattccgcagggagatggaaaaacttagaaaccagcaatccagggattta
acgttggaggttgatcgagacagagatcttctaattcagcagaccatgaggcagctcaac
aatcattttggtcgcaggtgtgctaccactccgatggctgtacacagagtaaaagttact
tttaaggatgagccaggagaaggcagcggtgtagcacgaagcttttacactgctattgcg
caggcttttctgtcaaatgagaaactgccaaatctagattgtattcagaatgccaacaag
ggtacccatacaagtttgatgcaaagattgcgaaataggggagagagagatcgggaaagg
gagcgagagagagaaatgcggagaagtagtggcttacgagctggttctcggagagatagg
gatagggactttagaagacaactttccattgacacacggccttttagaccggcatcagaa
ggaaatcctggcgatgaccctgaccctcttccagcacacagacaagcccttggagaaagg
ctctaccctcgagtgcaagcaatgcaaccagcatttgcaagtaaaatcacaggaatgttg
ttggaattgtctcctgctcagcttcttctgttactagctagtgaagattcccttagagca
agagttgatgaagcgatggaactcattattgcacatggcagggagaatggtgcggacagt
atattggatcttggcttgctagactcttcagataaagtacaggaaaacagaaagcgacat
ggttccagccgcagtgtagtagatatggaattagatgatacagatgatggggatgataat
gcaccacttttttaccaacctggaaaacgagggttttatacaccaagacctggtaaaaac
acagaagcaaggctgaattgtttcagaaacattggcagaatcctaggattgtgcttgttg
cagaatgaactatgtcccatcacgctaaataggcacgtaatcaaagttcttcttgggaga
aaggtaaactggcatgactttgctttttttgatccggttatgtatgaaagccttcggcaa
cttatcctcgcttcccagagtacagatgctgatgcagtgtttgcagcgatggacttggcc
tttgccatagacctgtgtaaggaggagggcggagggcaggttgaacttatttccaatggt
gtaaatataccagtcactcctcagaatgtatatgagtatgtccggaaatacgcagaacac
cgaatgttggtagtagcagaacagcctctccatgcaatgaggaaaggtctcctggatgta
cttccaaagaattcattagaagatttgacagcagaagatttcaggcttttggtaaatggc
tgtggtgaagtgaatgtgcaaatgctaatcagttttacttctttcaacgatgagtcagga
gaaaatgctgagaagcttttgcaattcaagcgttggttttggtctatagttgagaagatg
agtatgacagaaagacaagatctagtttacttttggacctcaagtccatctttgcctgct
agtgaggagggattccagcctatgccatcaatcacaataagaccaccagatgaccaacat
cttcctacagcaaacacttgcatttctcgcctttatgtcccactctattcctctaagcag
attttgaaacagaaactattactcgccattaagaccaagaattttggttttgtgtag
DBGET
integrated database retrieval system
