Cuculus canorus (common cuckoo): 104056744
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Entry
104056744 CDS
T08597
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104056744 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104056744 (RAD54B)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104056744 (RAD54B)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TusA
Flavi_DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104056744
NCBI-ProteinID:
XP_053915640
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All DBs
Position
2:25979025..26046753
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AA seq
917 aa
AA seq
DB search
MRRSAAPSQVLGNVAKKPRFIPPGKSIAVCLKNEAEQMDQEMKLKEIDEIEGSTSLLSKI
YGQNQNSNFTQPVESAGKVKTAKACFSVNKCSKVEMKTANMPKTDALYLPTSGTAKEEAA
QEEPDCLAKYFSVVWCKASKKKHKKWEGDAVLIAKGKSVILKDMEGKDIGRGTGYKSKEL
DSLNEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIRTHDTVPSPLSQTNMKPFCKPFK
SVSHPSTKENIFKDSQSYKPRHDPSAPNSLVMPRPNASHQWTFNKAGLPVVDVVVDPYVA
NNLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGVYGCKP
VLKRALIVTPGSLVNNWKKEFQKWLGSERIKVFTAGQDHKVEEFISSPLYSVLIISYEML
LRSLDPIQAIEFNLLICDEGHRLKNSSIKTTTALTSLSCERRIILTGTPIQNDLQEFYAL
IEFVNPGILGSLSTYRKIYEEPIVRSREPSATKEEKELGEKRAAELTRLTGLFILRRTQE
VINKFLPPKKESIIFCRPTALQLELYQKLLSSRVIRSCLQGRLENSPHLICIGALKKLCN
HPCLLFKAIKEKSCDPVSGEHDESSLYEGLLDVFPQDYTSDTFSERDSGKLQVLVKLLAA
IHELNSSERVVVVSNYTQTLNILQEMCKHYGYSYTRLDGHTPVSQRQQIVDTFNSKFSPA
SIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGS
IEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSIEELRNLFTLHEDSSCITHDLLECDCMG
KKDHQNLSSEKTTVPRSCQLGQNHGKPDSKKPLSMSQLMQWKHFSGQHQALADPFLERIK
ENVSFIFQNVTSPTSAS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatcagcagctcccagtcaagtgctaggaaatgtagccaaaaagccaaggttt
ataccaccaggaaaaagtatcgcagtttgtctcaagaatgaagctgagcagatggaccaa
gaaatgaaattaaaggagatagatgagattgagggaagtacttcattgctttctaaaata
tacggccagaatcaaaattcaaattttacacagcccgtggagtcagctggaaaagtaaag
actgcaaaagcatgtttcagtgttaataagtgtagcaaggtggaaatgaaaacggcaaat
atgcccaaaactgatgcactgtatttaccaacatcagggacagcaaaggaagaagcagct
caggaagaacctgactgccttgcgaaatatttcagtgttgtgtggtgtaaggcatcaaag
aaaaagcacaagaaatgggaaggtgatgctgttcttattgcaaaaggaaagtcagtaata
ttgaaagatatggaaggcaaagacattggaagaggtaccggatataaatctaaagagcta
gacagtcttaatgaaggtcaaacactgatggttggaggaaaagaaattgaagtgatgggt
gtaatttcagcagatgacttcagcagtggcaggtgctttcaggctggaataaggactcat
gacacagtcccatctcctttatctcaaacgaatatgaaaccattttgtaaaccattcaaa
agtgtcagtcatcccagtactaaagagaatatatttaaagattctcaaagctacaaacct
cgtcacgatccaagtgcaccaaattctctagttatgccaagaccaaatgcaagccatcag
tggaccttcaataaggctggtttacctgtggtggatgtagttgtggatccttatgttgca
aataatctccgaccacatcagaaagaaggaattatatttctatatgaatgcgtaatggga
atgagagtcagtggcagatttggagctattcttgctgatgaaatgggattaggaaaaaca
ttgcaatgcattgcacttgtctggactcttctgcgtcaaggggtctatggatgcaaacct
gtactaaagcgagcactaattgtcacccctggcagtcttgtaaacaactggaaaaaagaa
tttcagaaatggttgggaagtgaaaggatcaaggtttttacagctggtcaggaccataaa
gtagaagaattcatcagttctccactttattcagttttgataatcagttacgagatgcta
ctgcgatctttggatccaattcaggctatcgaatttaacctcctaatctgtgatgaagga
catcgtctgaaaaatagctctataaagacaactactgccctcactagtctgtcctgtgag
agaagaattatccttactggtactccaatccaaaatgacttgcaagaattttatgcatta
atagaatttgtgaatccaggaatacttggttctttatccacatatagaaagatatatgag
gaaccaattgtcaggtctagagaaccttcagcaacaaaggaggaaaaggaattaggagaa
aaaagagcagcagaactcacgcgcctcactggactctttattcttaggagaacacaggag
gttataaacaaatttctgcctcccaaaaaggaaagcataatattctgccgaccaacagca
ctgcaacttgaattgtatcaaaaactgcttagttctcgagttattaggtcctgtctacaa
ggcaggctagaaaacagccctcacctaatatgtattggagctttgaaaaaactctgcaat
catccatgtcttctgtttaaagctataaaggaaaaaagctgtgatcctgtgtctggtgaa
catgatgagtccagtctctacgaaggtctactagatgtctttccacaagactatacttct
gatactttctccgaaagggattcaggaaagttgcaggtgctggtgaagttgttagcagca
atccatgagctcaactcttctgaaagagtcgtagtggtgtccaattacactcagacatta
aacatactacaggagatgtgcaaacattatggatattcttacaccagacttgatggacat
actcccgtctcccagagacaacagattgttgatacttttaacagtaaattcagtccagct
tctatctttttgctgagttcaaaggctggcggagtaggactgaatctggttggagcatct
catttgatcctgtatgatatcgactggaatccagctacagatattcaggcaatggctcga
gtgtggagagatggccagaaacatactgtacatatctacagactgctaaccacaggttca
atagaagaaaagatttatcaaagacagatcagcaagcaagacctttctggggcagttgta
gacctttccaagacatctgaacacatccatttttccattgaggagcttagaaatctcttt
acacttcatgaagattccagctgcattacccatgacttgcttgagtgtgactgtatggga
aagaaagatcatcaaaatctttcctcagaaaagactactgtgcctagaagttgccagctt
ggacaaaatcatgggaagcctgattcaaagaaaccactctccatgtcacagttgatgcaa
tggaaacatttctctgggcaacatcaggctctagctgatcctttccttgaaaggataaaa
gagaatgtttctttcatttttcagaatgtaaccagtccaacttctgcgtcctaa
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