Cuculus canorus (common cuckoo): 104056763
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Entry
104056763 CDS
T08597
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104056763 (DCAF13)
04121 Ubiquitin system [BR:
cuca04121
]
104056763 (DCAF13)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Other 90S particles
104056763 (DCAF13)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104056763 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
KNTC1_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
RMC1_N
Motif
Other DBs
NCBI-GeneID:
104056763
NCBI-ProteinID:
XP_053913778
LinkDB
All DBs
Position
2:complement(22258097..22287268)
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AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRDTKLDLQRVPRNYDPLLHPFEVPREYTRALNATKLERVFAKPFLS
SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVKIWNLTKRQCIRTIQAHEGFVRGMCARFC
GTSFFTVGDDKTVKQWKMESPEYGEEEEPIHTILGKTVFTGIDHHWKEAVFATCGHQVDI
WDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRKSTPLKKVILNMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRYLESPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSVRIFPVDKGRSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPREKAAMNYNQKLKEKFQYHPKIRRIAQHRHLPRSIFCQIKEQRIMREARRRKELN
RRKHSKPGSVPFVSERKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgaaggtgctgagccgcaaccccgatgattatgtccgcgacaccaagctggac
ctgcagcgcgttccaagaaactatgaccctctactgcatccatttgaggttccaagagag
tacacgagagctctgaatgcaacaaagctagaacgtgtatttgcaaaaccctttcttagc
tcacttgatggccacagagatggagttaattgcatggccaaacatccaaagagtttgtct
acagtgctttctggagcttgtgatggagaggttaaaatttggaacttgaccaaacgccag
tgtattcgtactatacaagcccatgaaggctttgttcgaggcatgtgtgctcgtttctgt
ggtacatcattctttactgttggtgacgacaaaactgtgaagcagtggaaaatggagagc
ccagaatatggagaagaagaagaacctattcatacaatacttggaaagacagtgtttaca
ggaattgatcaccactggaaggaagctgtttttgccacctgtggccatcaagtggacatt
tgggatgagcaaaggacaagtcccatgtgttctctgacgtggggttttgatagcataagc
agtgtaaaatttaatcccattgagacataccttttgggaagctgtgcttctgacagaaat
attgtgctatatgatatgagaaaatcaactccactaaagaaggttatcttgaacatgagg
acaaatacactgtgttggaaccccatggaagctttcatttttactgcagcaaatgaagat
tacaacttgtatacttttgatatgcgctatcttgaatcacctgtgatggtgcatatggat
cacgtgtctgctgtacttgatgtggattattctcccactgggaaagaatttgtctctgcc
agctttgataagtctgtccgcatttttcctgtagacaaaggtcgcagcagggaggtgtat
catacaaagcgaatgcagcacgtaatcactgtaaaatggacttcagataacaaatacatt
ctgtgtggctcagatgagatgaatattcgtctgtggaaagctaatgcttctgaaaaactg
ggagtgcttgcaccacgagaaaaggcagctatgaattacaatcagaagctgaaggagaag
ttccagtatcacccaaagatcagacgcatagctcaacaccgtcacttacctaggagtata
ttttgccaaataaaggagcagcgtatcatgagagaagctcgtcggcgaaaggaactgaat
cgtcgtaaacacagtaaaccaggatctgtgccatttgtgtcagagaggaagaaacatatt
gtggcagtagtgaaataa
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