Cuculus canorus (common cuckoo): 104056788
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Entry
104056788 CDS
T08597
Symbol
STXBP5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104056788 (STXBP5)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104056788 (STXBP5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104056788 (STXBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_Vps41
VPS8_N
Beta-prop_VPS8
WD40_like
Synaptobrevin
Beta-prop_DCAF12
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
104056788
NCBI-ProteinID:
XP_053917976
LinkDB
All DBs
Position
3:complement(52817649..52927463)
Genome browser
AA seq
1153 aa
AA seq
DB search
MRKFNIRKVLDGLTAVSAVASAASSAAQQQQAGNRESEIQETLQSEHFQLCKTVRHGFPY
QPSALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALA
DDTLHLWNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSG
YVIMWNKAIELSSKSHPGPIVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTHDE
AIHSVAWHHEGKQFICSHSDGTLTIWNVKSPTKPFQTITPHGKQLKDGKKPEPCKPILKV
EYKTTRAGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPND
FQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYS
VGARQKRQGYSKKEWPISGGNWGLITQSYPEIIITGHADGSIKFWDASAITLQVLYKLKT
AKVFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVTTE
VIPMLEVRLLYEINDIETPDGEQVPPLPTPGTGSNPQSIVPQSHPSTSSSSSDGLRDNVP
CLKVKNSPLKQSPGYQTELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNCNGIAMVDYL
QKTVLLNLGTIELYGSNDPYRREPRSPRKTRQPSGAGLCDINEGTVVPEDRCKSPTSGSG
SPNNSDDDQKMNNFIEKVKTKSRKFSKMVANDIAKMSRKLSLPTELKPELDVKDNSFSRS
RSSSVTSIDKESREAISALHFCETFTRKADTSPSPCLWVGTTLGTVLVIVLNLPPGGEQR
LLQPVIVSPSGTILRLKGAILRMAFLDTTGSLVPPAHEPWREHNVTEDKDEKDKSKKRRP
VSVSPSSSQEISENQYAVICSEKQAKVISLPSQNCIYKQNITETSFVLRGDIVSLSNSIC
LACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTY
SQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESASGKASRSLA
QHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLGELEEKTAAMLYSADSFSKHAHE
MMLKYKDKKWYQF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatttaacatcaggaaggtgctggacggcctgacggcggtctcagccgtggcg
tcggcggcgtcgtccgccgcgcagcagcagcaggcggggaaccgggagagcgaaatccag
gagacgctccagtccgagcacttccagctctgcaagactgtacgccatggtttcccctat
caaccttcagccttggcatttgatcctgttcagaaaatactggctatcgggactcagact
ggagcactgaggctctttggtcggccaggagttgaatgctactgccaacacgacagtgga
gctgcagtgatccagcttcagttcctgattaatgagggagctcttgtgagtgccttggct
gatgataccttacacctgtggaacttacgtcagaagagacctgctatacttcattcactc
aaatttaaccgagaacggataacattttgtcatctgcctttccaaagtaaatggctatat
gtgggcaccgaaagaggaaacattcacattgtcaatgtggaatcatttactctctcaggc
tatgtcatcatgtggaataaagccattgaactgtcatccaaatctcacccaggacctatt
gtccacatcagtgacaatccaatggatgaaggcaagcttctgattggctttgagtctgga
acagtggtattatgggatctgaagtcaaagaaggcagattacagatacacacatgacgag
gcaatccactctgtggcttggcatcatgaagggaaacaatttatttgtagtcactcagat
ggtaccttgaccatatggaatgtaaaatctcctaccaaaccattccagacaatcactcca
catggaaagcagctgaaagatggaaagaagccagaaccatgcaaacctatccttaaggtg
gaatacaaaacaactagagctggggagcctttcatcattctctcggggggcttgtcatat
gacaccgtaggaagaagaccttgtttaacagttatgcatgggaaaagtactgctgtgcta
gaaatggattattctattgttgattttctaaccctctgtgaaacaccatatcctaacgac
tttcaggagccatatgccgtagttgttctcctagaaaaggacttagtactgattgacctt
gcacaaaatgggtaccctatatttgagaatccatatcctctgactatacatgaatctcca
gttacctgttgtgaatattttgccgattgtcctgtggaccttatacctgcactctattca
gttggtgctcgacagaaacgtcaaggttacagtaaaaaggaatggcctatcagtggaggc
aactggggtttgatcactcagagctatccagagattattattacagggcatgctgatggg
tcaatcaagttttgggatgcctcagcaataacgctgcaagtactttataagctaaaaaca
gccaaagtatttgaaaagtcacggaataaagatgacagaccaaacacagatatagtagat
gaagatccatatgctattcagatcatctcatggtgtccagaaagtagaatgttgtgcata
gctggagtttctgcacacgtcattatttacaggttcagcaagcaggaagtcacaacagaa
gtcattccgatgctggaagtacgtctattatatgaaataaatgatatcgaaactccagat
ggggagcaggtgccacctttaccaactccaggcacaggttccaatcctcagtccattgtt
ccccagtctcatccatctactagtagcagttcatcagatggacttcgtgataacgtcccg
tgtttgaaagttaaaaattctcctctcaagcagtcaccaggctaccaaactgagctagtt
atccagctagtgtgggtgagtggagaacctcctcaacagataaccagcttagcagtcaac
tcagcatacggactagtagtttttggaaactgtaatggcattgccatggttgattacctc
cagaagacagtgcttttgaatctaggcactattgaattgtatggttccaatgatccttat
cgcagggagccacgatctccccgaaaaactcgtcaaccgtctggagcaggtctttgtgat
attaatgagggtacagtggtgccagaagatcgctgcaaatcacccacttcaggttctggt
tcaccaaacaattctgatgatgatcagaaaatgaataattttatagaaaaggtgaagacc
aaaagcagaaagttttccaagatggtagccaatgacatagcaaagatgtccaggaagcta
agtttgccaactgagttaaagcctgaattagatgtcaaagacaactctttcagtcgatcc
cggagttctagcgtaactagcattgataaagagtcacgtgaagcaatttcagctcttcat
ttttgtgagactttcacaagaaaggctgatacatcaccttccccatgcctgtgggtcggg
accacactgggtacagtgcttgtcattgtactgaacttacccccaggaggagagcaaaga
cttcttcagccagtaattgtttctcctagtggaaccatcctgaggctaaaaggggcaatc
ttgagaatggcttttctggataccacaggatctttggtcccaccagcacatgaaccctgg
agggaacacaatgttactgaagataaagatgaaaaagataaatcaaaaaagcgacgacct
gtctcagtgtccccatcttcctctcaggaaatcagtgaaaaccaatacgcagtgatatgt
tcagaaaagcaagcaaaagttatctcactgccatcccagaactgtatttataagcaaaac
ataacagagacttcttttgttcttcgtggagacatagtgtcattgagtaacagtatctgc
cttgcatgtttctgtgccaatggacatattatgacttttagtttgccaagtttaaggccg
ttgttggatgtatattatctgccactcaccaatatgcggatagccagaacattctgcttc
accaataatgggcaagcactctatcttgtctcgccaactgaaatacagaggctcacctac
agtcaagaaacatgtgaaaatcttcaggaaatgttgggtgagctcttcactcctgtagaa
acaccagaagcaccgaacagggggttctttaaaggcctctttggagggggagcacagtca
cttgacagggaagaactctttggagaatcagcatcagggaaggcatcaagaagtctggcc
cagcatattccagggcctgggggtattgaaggtgtcaaaggagcagcatctggtgtagtt
ggtgaactagcacgagcccggttggcactagatgaaagaggacagaaactaggagaactg
gaagaaaaaactgcagctatgctttacagcgctgattctttctctaaacatgctcatgag
atgatgttgaagtacaaagacaagaagtggtaccaattctga
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integrated database retrieval system
