Cuculus canorus (common cuckoo): 104056820
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Entry
104056820 CDS
T08597
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104056820 (ZC3H12D)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104056820 (ZC3H12D)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
Regnase_1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
104056820
NCBI-ProteinID:
XP_009556404
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All DBs
Position
3:51873864..51892662
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AA seq
629 aa
AA seq
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MALTSSLSSKPMPPCSREVSTAGVEVHQSKLDFFCKLGYGKQDICKVLENLGQEALEDDV
LKELIRMGSKPQALESQAQPSSLKLVARGSCSTTPASKWLAEDESDSSSYLRPIVIDGSN
VAMSHGNKEVFSCWGIQLAVDWFRERGHTYIKVFVPLWRKEPPRQDSPIADQHILEELEK
QSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFIEQRL
LMYSFVSNRFMPPDDPLGRHGPSLNNFLSKKPVLPEPKWQPCPYGKKCTYGNKCKFYHPE
RPHQAQLSVADELRAKIKVPLNLVKEEKHNCSLQRTGEEPALPDACTAMLREASSCARSP
CYLGRSQGSCCEQPSGAWASGLSSDRGLDQRLLQPELLQDQPLLEKMSVLSVGDDTCDYN
QSIRTSQDRKMMDSLHRCGDLRHNLYSLHYPHRLDHTCLPGCSFQQSVLLSTQGGTCPDH
SWPQECCSMHGMGQRSHYIPDGIQHKQDLETLQRVLLQSAALAPDSLHSYSEHQLQQHYF
PHRPPRQHFLLDSSKGLGFLQKAHANPNTSYSDYWPTPAARPLSAQQANIHMELCSLFPY
SEVNHIMALYPDIKDFASLTLLIQRHRNL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcactgactagttcactttctagcaagccaatgccaccatgctccagagaagtttct
acagcaggagtagaagtgcaccagagcaagctggattttttctgcaagctgggctatggt
aagcaggacatctgcaaagtgctggagaacctgggccaagaggccctggaggatgatgtg
ctgaaagagctaattcggatggggagcaaacctcaagctctggaaagccaggctcagcct
tcttcactaaaacttgttgcccgtggatcatgtagcactacaccagcatcgaaatggctt
gctgaagatgaaagtgattcttccagttacttgagacccattgtgattgatggcagcaat
gtggcgatgagtcatggaaacaaagaggtattctcctgctgggggatccagctggccgtg
gattggtttcgagagaggggacacacgtacatcaaggtttttgtcccactctggagaaag
gagcccccccgacaagacagtcccattgcagatcagcacattcttgaagagcttgaaaag
caatcaatccttgtgtacaccccatcccggaaggtgaaaggcaagagggtagtttgctac
gatgatcgctatatagtgaaagttgcttatgagaaagacggagtcattgtttccaatgac
cactaccgggatctccagaatgaaaaccccgaatggaaatggtttattgagcagcgactg
ctcatgtactcttttgtcagtaacaggtttatgcctcctgatgatccattaggccggcat
ggacccagtcttaataacttcctcagcaaaaagccagtgcttcctgaaccaaagtggcag
ccttgcccctatggtaaaaaatgcacctatggcaataaatgcaaattttaccacccagag
agaccacatcaagctcagctttcagttgctgatgagctcagggccaaaataaaagtccca
ttaaacctggttaaagaggagaagcataattgctctctgcagaggactggagaagagcct
gcactgcctgacgcctgcacagcaatgctgcgagaagccagcagctgcgcaaggtctccc
tgctacctggggaggtcccaaggtagctgttgtgagcagccatctggtgcctgggccagc
ggcctcagctctgaccggggactggaccagcggttgctacagccggagctgctgcaagat
cagccactcctggagaagatgtcagtgctatccgttggtgatgacacctgtgactacaat
cagtccatacgcacctctcaagacagaaagatgatggacagccttcatcgctgtggtgac
ctcaggcacaacctgtactcgcttcattacccccacagattggaccacacctgcttacca
ggatgttctttccagcaaagtgtgctcctgtctacccagggtggaacgtgcccagaccac
agctggcctcaggagtgctgcagcatgcatgggatggggcagaggagccactacatccct
gacggtattcagcacaaacaggacctggagactttgcaacgtgttttgctgcagtccgca
gctcttgcccctgactcacttcactcgtacagcgagcatcagctgcagcagcactatttc
ccccacaggcccccacggcagcactttctgttagactccagcaaggggctgggcttcctc
cagaaagctcatgctaatcccaacacttcttacagtgactactggcccaccccagctgca
aggccactctctgcccagcaagcaaacatccacatggagctgtgctctcttttcccgtac
agtgaggtgaatcacataatggctttgtaccccgatatcaaggattttgctagcttgact
ttactgattcaaagacacagaaacttgtga
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