Cuculus canorus (common cuckoo): 104056882
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Entry
104056882 CDS
T08597
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X2
KO
K10373
tropomyosin 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04260
Cardiac muscle contraction
cuca04261
Adrenergic signaling in cardiomyocytes
cuca04814
Motor proteins
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104056882 (TPM1)
04820 Cytoskeleton in muscle cells
104056882 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104056882 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
104056882 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104056882 (TPM1)
04147 Exosome [BR:
cuca04147
]
104056882 (TPM1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
104056882 (TPM1)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of microglial cells
104056882 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
CCDC39
Rod_CreS
TMF_DNA_bd
ERM_helical
Laminin_I
HAUS1
Sec2p
PUMA_CC
CENP-F_leu_zip
ATG16
DUF3450
FKBP15
DUF745
Lebercilin
GAS
ADIP
DUF4200
CC_Bre1
TMP_N
DUF1664
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
104056882
NCBI-ProteinID:
XP_009556468
LinkDB
All DBs
Position
12:complement(19394060..19412656)
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaaactggacaaggagaacgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagctggaa
gacgagctggtggctctacaaaagaagctgaaaggcactgaggatgagctggacaaatac
tccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggccacagat
gctgagagtgaggtagcttctctgaacagacgcatccagctagttgaggaagagttggat
cgggctcaagagcgcttggctactgccctgcagaagctggaggaggcggagaaggctgca
gatgagagtgaaagaggaatgaaggtcattgaaaacagagctcagaaggatgaagagaag
atggaaatccaggagatccagcttaaagaagctaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgtaaacttgtgatcattgagagcgacctggagcgggctgag
gagcgtgctgagctatcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcgcagaaagaggacaaa
tatgaagaggagattaaagtgctgactgacaaactgaaggaggctgagactcgtgctgaa
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagagaaagtg
gcgcatgccaaagaagaaaaccttagtatgcatcagatgctggatcaaactttactggag
ttaaacaacatgtga
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