KEGG   Cuculus canorus (common cuckoo): 104056982
Entry
104056982         CDS       T08597                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104056982 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuca03400]
    104056982 (WDR48)
DNA repair and recombination proteins [BR:cuca03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104056982 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR54 Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 104056982
NCBI-ProteinID: XP_009556591
LinkDB
Position
2:155026221..155050158
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPALWVATTKSSVSKWTLKGINNFRASGDYDNDCTNPIPPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSNPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEINHAVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcaggtctcctatgtg
attagagatgaagtggagaagtataaccgaaatggggtgaatgcactgcagctggatcca
gcattgaacagactcttcacagcaggccgagactctattataaggatatggagtgtcaat
cagcacaagcaagacccttatatagcatccatggaacatcacacggattgggtaaatgat
attgtgctctgctgcaatggtaaaacattgatatctgcttcttcagatactactgttaag
gtgtggaatgcacataagggattttgcatgtcaacactaaggacacataaggattatgtg
aaagccttagcatatgcaaaagataaagaactggtagcgtctgctgggctggacagacag
atattcctctgggatgtaaatactctaacagcactgactgcctcaaataacaccgttaca
acttcttccctgagtgggaacaaagactctatctacagccttgcaatgaatcaaatggga
acagttattgtatcagggtccacagaaaaggttctaagggtgtgggatccgagaacttgt
gcaaaactaatgaaactcaaagggcacacagacaatgtaaaagctttgttgttgaacaga
gatggcacccagtgtctttcaggcagctctgatggaactatccgcctgtggtcccttggg
cagcagaggtgtatagccacgtatcgagtccatgatgaaggtgtttgggctctgcaggtc
aatgaagccttcactcatgtttattcaggaggaagagacaggaagatttattgtacagat
ttacgaaatcctgatatccgtgtgcttatctgtgaagaaaaggcaccagttcttaagatg
gagcttgatagatcagctgatccccctccagcactttgggttgcaacaacgaaatcctct
gtgagtaaatggactttgaagggaattaataattttagagcatctggagattatgataat
gattgtaccaatcctataccacccctgtgtacacagcctgaccaagttataaaagggggt
gctagtattattcagtgccacatccttaacgacaagagacacatattaaccaaagacaca
aataataatgtggcatactgggatgtcttgaaggcatgtaaagttgaagaccttgggaaa
gtagattttgaagaagaaattaagaagagatttaaaatggtgtatgtgccaaactggttc
tcagtagacttgaaaactgggatgctgacaattactttggatgaaagtgactgctttgca
gcctgggtttcggcaaaggatgctggatttagcaatccagatggttctgatccaaaattg
aaccttggagggcttctgctacaagcacttctggagtattggcctagaacacatatcaat
ccaatggacgaagaagaaaatgaaataaatcacgcagtgaatggtgagcaggagaacaga
gtccagaaaggaaatggatactttcaagtgccaccacacacaccagtgatttttggtgag
gctggaggacgcactttgttcaggttattatgtcgggattcaggtggtgaaactgaatct
atgcttttgaatgaaactgtgccacaatgggtaattgacatcactgtggacaaaaatatg
cccaaattcaataagattcccttctacctccagcctcattcatcatcaggggcaaaaact
ctaaaaaaagaccgactgtcagcaagtgatatgctgcaggtgagaaaagtaatggaacat
gtgtatgagaaaatcataaacttggataatgagtctcagacaactagctcttctaataat
gaaaaagcaggagaacaagaaaaagaggaggacatcgctgtgctagcagaggagaagatt
gagcttctgtgccaggaccaggttttggatccaaacatggaccttcgaactgtaaagcac
ttcatttggaagagtggtggtgatctgacacttcattatcgccagaaatcaacgtga

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