Cuculus canorus (common cuckoo): 104057035
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Entry
104057035 CDS
T08597
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104057035 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104057035 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cuca00536
]
104057035 (SHH)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C46: hedgehog family
104057035 (SHH)
Glycosaminoglycan binding proteins [BR:
cuca00536
]
Heparan sulfate / Heparin
Morphogens
104057035 (SHH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
DrmE_C
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
104057035
NCBI-ProteinID:
XP_053916683
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All DBs
Position
2:151751189..151764670
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AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADAEGRLLYSD
FLTFLDREDDSHKLFYVIETRQPRARLLLTAAHLLFVAPQHNHSQEGTPSTQALFASRVR
PGQWIYVLDEGRQQLLPAAVHSVSLREEASGAYAPLTAQGTILINQVLASCYAVIEEHSW
AHWAFAPFRLLQGMLDTLCPSSEGAPVGAPTASGIHWYSRLLYHISSWVLDSDSLHPLGM
VVSSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccttggcgatctcggtgatgaaccagtgg
cccggggtgaagttgcgggtaaccgagggctgggatgaggacggccaccactccgaggag
tccctgcactacgagggtcgcgccgtggacatcaccacctcggaccgggaccgcagcaaa
tacggcatgctggctcgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaattcggtggcagctaaatcagggggc
tgcttccccggctcggccacagtgcacctggagcaaggcggcaccaagctggtaaaggac
ctgagccctggagaccgggtgctggcagctgatgcagagggccggctgctctacagcgac
ttcctcaccttccttgaccgtgaggatgactcccacaagctcttctacgtcatcgagaca
cggcagccccgggcccggctgttgctgacggctgcccatctcctcttcgtggccccccaa
cacaaccattcacaggaggggacccccagcacccaggcgctctttgccagccgtgtacgg
ccgggccaatggatctacgtgttggacgagggcaggcagcagctcctgccggcggctgtg
cacagcgtctccctgcgggaggaggcttcgggggcgtacgccccacttaccgcccaaggc
accattctcatcaaccaggtgctggcctcctgctatgccgtcattgaggagcacagctgg
gctcattgggcgtttgctccattccgcctgctccaggggatgctggacaccctctgcccc
tccagtgagggggccccagtgggtgcccccaccgcctctggcatccactggtactctcgc
ctcctttaccacatcagcagctgggtgctggatagtgactctctgcacccgctgggcatg
gtggtgtcgtccagctga
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