Cuculus canorus (common cuckoo): 104057048
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Entry
104057048 CDS
T08597
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104057048 (TOP1)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104057048 (TOP1)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Topoisomerases
104057048 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
104057048
NCBI-ProteinID:
XP_053937480
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All DBs
Position
16:7057545..7124041
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AA seq
800 aa
AA seq
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MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSRHCHEL
YLGEVHQSQSLPCFEDAHCCPSKTCYLSEHKDSSEKKHKDKEKTKHKDGSSEKHKDKHKD
KDKEKRKEEKMKSSSGDIKIKKEKENGFSSPPRIKDEPDDDGFYASPKEDSKPLKRPRED
DDAEYKPKKIKTEDIKKAKKRKQEEEEDSKAKKAKNKDKKVPEVDKKKKPKKEEEQKWKW
WEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSTKAEEVATFFAKMLD
HEYTTKEIFRKNFFKDWRKEMTSEEKSTITNLSKCDFTHMSQYFKAQTEARKQMSKEEKQ
KIKEENERLLKEYGYCVMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIIN
CSKDSKIPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYE
TARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCC
SLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLF
DRLNTNILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTNPDDNIAAKILSYNRANRA
VAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLADARRELKSAKADAKVRRDEKSKKTVE
SKKKAVQRIEEQLMKLEVQATDREENKQIALSTSKLNYLDPRISVAWCKKWGIPIEKIYN
KTQREKFAWAIDMAEEDYEF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaccagctgcacaacgactcccagatcgaggcggatttccgagcgaacgat
tctcacaaacacaaagataaacacaaagaccgagaacaccggcacaaagagcacaagaag
gacaaggaaaaagaccgggaaaagtccaagcacagtaatagcagacactgtcatgagctt
taccttggagaagtccatcaatcgcagtctttaccatgctttgaagatgcacattgctgt
ccgagtaaaacatgttatttaagtgagcacaaagattcctcggaaaagaaacacaaagac
aaggagaaaactaaacacaaagatggcagctcagagaaacacaaagacaaacacaaagat
aaagacaaggagaagagaaaggaggagaagatgaagtcatcttctggtgatataaaaata
aagaaggaaaaggaaaatgggttctccagcccaccacgtattaaagatgaaccagatgat
gatgggttttatgcatctcctaaagaggactccaaacccctgaagagacctcgagaagat
gatgatgctgagtacaaacccaagaaaatcaaaacagaagacatcaagaaagcaaagaaa
aggaaacaagaggaagaagaggacagcaaagcaaagaaggctaagaacaaagacaagaag
gtccctgaagtggacaagaaaaagaagccgaaaaaagaagaagagcaaaaatggaaatgg
tgggaggaagagcgttaccctgaaggcattaaatggaagttcctagagcacaaaggtcct
gtatttgctccgccatacgaacctctgcctgaaaatgtcaagttttattatgatggtaaa
gtcatgaagctgagtaccaaagcagaagaagttgccacattctttgcaaaaatgcttgat
catgagtacactacaaaggagatcttcaggaaaaactttttcaaagactggagaaaggaa
atgacctctgaagagaagagcactatcaccaacctcagcaagtgtgacttcacccacatg
agccagtatttcaaagctcagacggaagctaggaaacagatgtccaaggaggaaaaacag
aaaatcaaagaggaaaatgagcggctattgaaggaatatggttactgtgtgatggacaac
cacaaggagaggattgccaactttaaaatcgaacccccaggtctgttccgaggtcgtggg
aaccatcccaaaatgggcatgctgaagagacgcatcatgccagaggacatcatcattaac
tgtagcaaggattccaagatcccttcccctccaccaggacacaaatggaaggaggtccgg
catgataataaggttacctggttggtgtcatggactgagaacatccaaggctccattaaa
tacattatgttgaaccctagctcaagaattaagggtgagaaggactggcagaagtacgag
acagctcggagattgaagaagtgtgtagataaaatccgaaatcagtatcgagaagactgg
aaatccaaagagatgaaagtacggcagcgggctgtggcactgtattttattgataagctt
gccctgagagctggtaatgaaaaagaagaaggcgagacagctgacactgtgggctgctgc
tctctgagagtagaacatatcaagctgcatcctgaactggatggccaggaatacgtggtt
gagtttgacttcctcggaaaagactccatccgatattacaacaaagtccctgttgagaag
agggtgtttaagaatcttcagctattcatggagaacaagcagcctgaggatgacctcttt
gaccgcctcaataccaatatcttaaataaacaccttcaagaccttatggagggactgaca
gccaaggtattccgtacttacaatgcctccatcacgctacagcagcagctcaaggagctc
actaatccggatgacaacatcgcagcaaaaatcctgtcctataatcgtgccaacagagcg
gttgccattttgtgtaaccaccagagggctccaccgaagaccttcgagaagtctatgatg
aacctgcagagcaagatcgatgccaagaaggagcagttagctgatgccaggagagaactg
aaaagcgccaaagctgatgccaaggtccggagggatgagaagtctaaaaagacagtggag
agcaagaagaaagcagtgcagaggattgaggagcaactgatgaagctggaggttcaggct
acagatagggaggagaacaagcagattgctttgagcacctccaaactcaactatctggat
cctaggatctctgttgcttggtgtaagaagtggggaattcctatagagaagatttataac
aaaacccaacgagagaaatttgcctgggctatcgacatggcagaggaagactatgagttt
taa
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