Cuculus canorus (common cuckoo): 104057069
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Entry
104057069 CDS
T08597
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104057069 (ZNFX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
DEAD
PhoH
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104057069
NCBI-ProteinID:
XP_053937118
LinkDB
All DBs
Position
16:complement(7540367..7553222)
Genome browser
AA seq
1971 aa
AA seq
DB search
MEGSGQEPPRAAARGHADPWDAGFIQRGGNGTKTVSGWPALLGESPQATNYTLQPRQREE
RILRFPQSSKNKPRIQGGEANSGGMGHWNEEENEERRIRPPGGQAPEGARAPWNEQEIQG
RGRRRYGGQAHNRARGPWNEKENEGRGRRYQGGQAQEGARELKNRQENKGRERRMQPQEN
PHLYQNHIPGGVQLSEQPRQVKRIGYRFLESLLQKDPSEVVITLASSLGLKELLSQTAMK
PSFLELICQVIKKACSSRVDRQSVQQLLGEVKESNFLKICLPQYVSDMVTETEPAVRYQY
PVHIANIVSLLQDLISIFPSSSVQKISILLTVLQASINALRDSGVDITEETEKNLNKVQM
LMQHLQEKKREGTLRADNYTLMQPQTDGEEGTYRTMTIYPTYDEVHHDGKPFLRPNIVSG
RYDSTSIYLDTHFRLLREDFVRPLREGILELLQSFGDKGLRKKKFDDIRIYFDARIITPL
CSLTGIVYKIQFDIKPLKYVRWQNSKRLLYGSLICMSKDRFETCLFATVSNRDNADLACG
IVQLCFNAQNQALLADVRPSDSFLMVETTAYFEAYRHVLEGLQEIQEDDIPFQKYIVECD
TQVKKPTYLTMSTAYNFAPLMEDLLSDEVMNPGVLRGQSVCVLDPKQWPSMETLRLDESQ
MQALNLALTKELAIIQGPPGTGKTFVGLKIVQALLTNKHVWQCIGQKSPILVVCYTNHAL
DQFLEGIYTFQKHGMVRVGGRSSSEVLKQFTLKELRKKCEFRYNLPLHLRRAYVNITAEM
KQAEQQLHEVAKHLECTMHGVLHERHLEACIAPQHWDSLMNGLDDKEFYNSALRHSVILE
WLGLGVTVFTQNAAENVGAENPGSLQEEEEEWEDEAEEELLEIPEEADLIQADRVIEDEE
AAKPQGGKEEEHRAVHELASVLLAMRLEDQEEEAPQLQQTVMQWEITTAQRKKMKQRMKL
ELRKLSAMTELEANTIRDLWQLDLSSRWKLYRLWLQTYQGVIRQRILQHEQQYQAAAERL
TELRLQEDLCILKEAEVVGMTTTGAAKYHQLLQKIKAQIVVVEEAAEVLEAHTITTMTKA
CQHLILIGDHQQLRPSVNVYDLAKNFNLEVSLFERLLKINFPFVCLKYQHRMRPEIAQLL
TPHIYRELENHPSVLKYENIKGVSSNLFFVEHDFPEQQIQEGKSYQNPHEAQFVVELCKY
FLCQDYLPSQITILTTYTGQLFCLRKLMPAKTFAGVKVNVVDKYQGEENDIILLSLVRSN
KEERTGFLQIPNRICVALSRAKKGLYCIGNMRMLGKCPLWSKIIQTLQEKGHIGRSLVLF
CQNHPETKTPVSTAADFSKVPEGGCNRPCEFRLSCGHVCTRACHPYDAQHKEYQCMKPCP
KVLCADGHRCQRLCYEPCGPCMVIVEKTIFRCGHLQMVPCSTADSEFLCQEPCQRKLICG
HTCNKFCGQECTKLCPELVTVTLKCGHKQRVKCWITEQMKHDKSVECNAKCSVLLECGHI
CSGSCHTCFGGRFHRPCSSPCKRFLVCSHKCQQPCTTECPPCQRECQNRCIHSRCGKKCG
EPCFPCAEPCEWQCQHYQCTNLCSEPCNRPRCNVPCAKLLRCGHLCSGLCGEPCPKKCLV
CDREELTQIFFGFEEDSDARFVQLEDCGHVFESQGLDHYMDEDDDVIKLKVCPMCQTPIR
KNLRYGTIVKRRLHEIEQVKEKIQGPAQEIESSRQRLQAALAENAVLHQMLPLKYRMLEE
KLNASNLSTKSIGLIENQLYFYEHVANLTNSIRKIDVNEWKGVTKRLDEVQEWLDKPRLC
FTGQEVSDLQSELHRLTCLLSLLAWCKGASGMITPVLVPEIARAREVLEGTKKFTAEDEA
AVKAKLEQLYAAFPVSGLGISDEERVQIVRAIGCPRGHWFKCRNGHVYVIGECGGAMERG
ECPECHEVIGGANHALASGNSLAPEMDGATYAAWSEAANDLLGFEQLRRLL
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgggcaggagccgccccgcgctgcggccagagggcatgcagatccttgg
gatgctggctttatacaaagaggcggcaatggaacaaagactgtgtcaggctggccagct
ctgttaggggaaagcccccaagccactaattatactcttcagcctaggcaaagagaggag
agaattttgaggtttcctcaatcaagcaagaataaacccagaatacaaggtggagaggcc
aacagtggaggtatgggacactggaatgaagaggagaatgaggaaaggagaataaggcct
ccaggtggacaagcacccgagggggccagagcaccctggaatgaacaagaaattcagggt
aggggaaggaggcgatatggtggacaagcacacaatagggccagaggcccgtggaatgag
aaagaaaatgagggtaggggaaggaggtatcaaggtggacaagcccaagaaggagctaga
gaactaaagaacaggcaagaaaataaaggcagggaaaggagaatgcaacctcaggagaat
cctcatctctaccagaatcatatcccaggaggtgtccagctcagtgagcagcctcggcaa
gtcaaaaggattggctatagattcctagaaagtctcctccagaaagacccttcagaagtt
gtcatcacgcttgcttccagtttaggtttgaaggagcttctttcccaaactgctatgaaa
cccagtttccttgagctcatttgccaggtgattaaaaaagcatgcagttcccgagtagat
agacagagtgtccaacagcttcttggagaggtgaaggagtccaactttctcaagatctgt
ctgccacagtatgtgtctgacatggtaacagaaacagagcctgctgtgcgttaccagtac
cctgtgcatattgctaacatcgtttcacttctccaggacctgatcagtattttcccatcc
agctctgtgcagaaaatctccattctcttgacagtcttgcaagcatccataaatgcccta
agagattctggtgtggacatcacagaagaaacagagaaaaatctaaataaagtccagatg
cttatgcagcatctgcaggagaagaaacgtgaaggcacgctgagggctgataactatact
cttatgcagcctcagactgatggtgaagaaggaacctaccgtacaatgacaatttatccg
acatatgatgaagtacaccatgatggaaaaccctttctacgtcccaatattgtttctgga
agatatgatagcacgagcatttatcttgacacccattttcggcttttgagagaagacttt
gtaaggcctttaagggaaggtatcttagagcttttgcagagctttggggacaaaggtttg
agaaagaaaaaatttgatgatatcaggatctactttgacgcacgcataattacccccctc
tgttccctaactggtattgtttacaagatccagtttgacataaaaccattgaaatatgta
cgatggcagaattccaaacggttgctatatggatccctcatctgcatgtccaaagatcgc
tttgaaacatgcctttttgccactgtttctaatcgtgataatgcagatcttgcctgtggg
attgtgcagctatgttttaatgcacagaaccaggcactgctggcagatgttcggccctca
gactccttcctcatggtagagacaactgcctactttgaggcctatcggcatgtgttagaa
gggttacaggaaatccaggaagacgatatcccattccagaagtacatcgtggaatgtgat
acgcaggtgaagaagccaacatacctgacaatgagtactgcctataactttgcacccttg
atggaagatctcctgtcagatgaagtgatgaaccctggtgttttgagagggcagagtgtc
tgtgttctagatcccaagcagtggccttcaatggaaactttgagattagatgagtctcag
atgcaggcattgaatcttgctctcaccaaggagctggctatcatccaaggacctcctggg
actgggaagacctttgtgggtttgaagattgttcaggctctcttgactaataagcacgtg
tggcaatgcattggccagaagtctcccatccttgtagtctgctacactaaccacgcgctg
gatcagttcttggaaggaatatacacattccaaaaacatgggatggtgcgtgttgggggc
agaagtagcagtgaagtcttgaagcaattcactttgaaggagctgaggaagaagtgcgag
tttcgatacaacttgccactgcatctccgcagagcctatgtgaatataaccgctgagatg
aaacaggctgagcagcagctccatgaagtagcaaagcacttggagtgcacaatgcatgga
gttttgcatgagcgccacttggaagcatgcattgcgccccagcactgggacagtctgatg
aatggtctggacgataaggagttctacaacagtgctttgcgacactcagtgattctggag
tggctgggccttggtgtaaccgtcttcacccagaatgctgcagaaaatgtaggggctgag
aatccaggtagtctgcaggaggaagaggaggagtgggaagatgaagcagaagaggaacta
ttggagatcccagaggaggctgacctgattcaagctgacagagtgattgaggatgaagag
gcagcaaaacctcagggaggaaaagaggaagagcacagagccgttcatgagctagccagt
gtgctgttggctatgaggttggaggaccaggaagaagaagcaccccaactccaacagacc
gttatgcagtgggagataactactgcccagaggaagaaaatgaaacagaggatgaagctt
gagctccgtaaactgagtgcaatgacagagttagaggctaacactattcgggatctgtgg
cagcttgacctgagctcccgttggaagctttacaggctttggctgcagacatatcaaggg
gttattcgccagaggattctgcagcatgaacagcagtaccaggcagcagcagaaaggctg
acagaactgagactgcaggaggatctttgtattctcaaggaggccgaagttgtggggatg
acaactacaggagctgccaaataccatcagctcttgcaaaaaataaaggcacaaattgtt
gttgtagaagaggcagcagaggtgcttgaggctcacactattactactatgactaaagct
tgccagcatctcatcctcattggagatcaccagcagctgcggcctagtgtgaatgtatat
gacctggccaagaacttcaatctggaagtctctctcttcgaacggctgttgaaaatcaat
ttcccttttgtctgccttaaatatcaacaccgcatgcgtcctgaaattgctcaacttctc
acccctcacatataccgggaactggagaaccatccttctgtcctgaagtatgagaacata
aaaggggtctcatctaacctcttctttgtggaacatgactttcctgagcaacagatccag
gaagggaaaagctaccagaacccacacgaggcccagtttgtagtggaactgtgcaaatac
ttcttgtgtcaggactatctaccttctcagatcaccattctcactacttacactggacag
ctcttctgcctgcgtaaactcatgccagccaagacttttgcaggtgtgaaggttaatgta
gtagataagtaccagggggaggaaaatgatattattctgctgtcactcgtgcggagcaac
aaagaggagagaactgggttcttacagattcctaataggatatgtgtagcattatccaga
gctaagaaggggctgtattgtattggaaatatgagaatgcttggcaagtgtcctctctgg
agcaagatcattcaaacccttcaggagaaaggtcacattggtcgatcattagtccttttc
tgtcaaaaccaccctgaaaccaagacaccagtatctacagcagcagacttcagcaaggtc
ccagagggaggctgtaatcgtccctgtgaatttaggctgagttgcggacatgtttgcaca
agggcatgtcacccgtatgatgcccagcacaaagagtaccagtgtatgaagccttgtcca
aaggtgctctgtgcagatgggcaccgctgtcagcgcttgtgttacgagccctgtggacca
tgcatggtgatagttgagaaaactatttttagatgtggccatctgcagatggtgccgtgc
tctactgcagacagcgagtttctttgccaagaaccttgccagagaaagttgatctgtggg
cacacgtgcaacaaattctgtgggcaggaatgcactaagttgtgtcctgaactggttaca
gtcactctgaaatgtggccacaagcagcgagttaaatgctggattactgagcagatgaag
catgacaagtctgtggaatgtaatgctaaatgttctgtgctgctcgagtgtggtcacatc
tgctcaggttcctgccacacctgctttggagggaggtttcataggccgtgtagtagccca
tgcaagcgctttttggtctgctcccacaagtgtcagcagccttgcactacagagtgccct
ccttgtcagagggagtgccagaaccgctgtatccacagtaggtgtggaaagaaatgtgga
gagccctgttttccgtgtgccgagccatgtgagtggcagtgccagcactaccaatgtacc
aatctttgctccgaaccatgcaataggcctcgctgcaatgtaccatgtgctaagctactg
cgctgcggtcatctttgttctggattgtgtggcgagccctgcccaaagaagtgccttgtt
tgtgaccgtgaggaactcacccagatattttttggcttcgaagaagattcagatgctcga
tttgtacagcttgaagactgtggccatgtctttgagtcccaaggccttgaccattatatg
gatgaagatgatgacgttatcaagctgaaggtgtgcccaatgtgtcagacacctatcaga
aagaatttgagatacggcaccattgtgaaaaggcggctacatgagatagaacaggtgaaa
gagaaaattcaaggcccagcacaggaaattgagtccagcaggcaaaggctgcaggctgcg
ctggcagagaatgctgttctgcaccagatgctgccactcaagtaccgcatgctggaagag
aaactaaatgcttctaatctttccacaaaaagtattggactaattgagaaccagctttac
ttctacgaacacgtagcaaacctaaccaattctataaggaaaattgatgtgaatgagtgg
aaaggggtgacaaagcggctggatgaagtgcaggagtggctggataagccacgcctctgc
tttacgggacaggaggtctctgacctgcagtctgagctccatagactgacctgcttgctg
agccttttggcatggtgcaaaggcgcaagcgggatgatcacccctgtgctggtgccagag
attgcccgtgcacgggaggtcctggaaggaacaaagaaattcacagcagaggatgaggca
gcagtgaaggccaagctggagcagctctatgcagccttccccgtctcagggctggggatc
tcggatgaggagcgggtgcagattgtccgtgccatcggctgcccccgcggccactggttc
aagtgcaggaacgggcacgtctacgtgattggggagtgcgggggggccatggagcgcggg
gagtgccccgagtgccacgaagtcatcgggggcgccaaccacgctctggccagcggcaac
agcctggccccagagatggacggcgccacgtacgcggcctggtccgaggcggccaacgac
ctgctcggcttcgagcagctccgccggctgctgtag
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