Cuculus canorus (common cuckoo): 104057097
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Entry
104057097 CDS
T08597
Symbol
NTRK1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04010
MAPK signaling pathway
cuca04020
Calcium signaling pathway
cuca04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104057097 (NTRK1)
04020 Calcium signaling pathway
104057097 (NTRK1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104057097 (NTRK1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cuca01001
]
104057097 (NTRK1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104057097 (NTRK1)
Protein kinases [BR:
cuca01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
104057097 (NTRK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
I-set
Ig_3
LRR_8
TrkA_TMD
ig
Ig_2
Haspin_kinase
LRR_5
Motif
Other DBs
NCBI-GeneID:
104057097
NCBI-ProteinID:
XP_053906756
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Position
28:3653650..3663891
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AA seq
788 aa
AA seq
DB search
MPPPSWLCVAALLLLPPPGTPAALCPRPCRCPRARSLLCREPETLRSLGPILRGGGFSDV
TIENQQALTTLTRADTEMLKDLRRLTISRTGLRLISSDAFLDTPKLSHVNLSSNALQSLS
WKTFQHLPLEELILVGNRFNCSCDLRWLQLWQNGSRAALGNQTLDCWEGNVPVPLGNRAL
QGCELPSIRIEHPEVVLRQGDNVNLTCLIAAEPPASGEWVLPDVGAELHVVTKLSNWEIV
LELINISSKLNHKDLTCRAENAVGPAEDSVTLNVTFPPVIVLLQEAISQHVWCIPFSVDG
NPVPTIRWLFNGTALTEGRYIHTSIMEYEQNSTVLHGCLQLNRPTHVNNGNYTLLVHNAL
GSAARSVQGVFMKNPFSFNPEEPIPVSLSPLGTRNSSLEGPVETTEEHTFGVSVAVALAI
FACLFLSVMLIVLNKCGRRSKFGINRSVVLAQEDDLAVSLHFMNLSPVSSAESKLEGLKS
NFIENPQYFCDACVHHVQRRDIVLKWELGEGAFGKVFLAECYNLLPEQEKMLVAVKALKE
VTESARLDFHREAELLTVLQHEHIVKFYGVCTEGEPLIMVFEYMKHGDLNRFLRSHGPDA
KILDQGQGQPCGQLALSHMLQIATQIASGMVYLASLHFVHRDLATRNCLVGHDLVVKIGD
FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPW
YQLSNTEAIECITQGRELEQPRTCPSEVYAIMQSCWQREPQQRRPIKEIHSCLQALVKTP
PVYLDILG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccccctcctggctgtgtgtggcggcgctgctgctgctgccccccccgggcacc
cccgccgccctctgtccccgtccgtgtcgctgcccccgagcgcggtccctgctctgccgg
gagcccgaaaccctccgcagcctcggaccgatcctgcgcggcggcggcttcagcgacgtc
accatcgagaaccagcaggcgctgacgaccttgacccgagctgacaccgagatgctgaag
gacctcaggaggctcaccatctccaggacggggctgcggctcatctcctctgacgccttc
ctggacacccccaagctgagccatgtgaacctctcctccaacgcgctgcagagcctgtct
tggaagaccttccaacatctgcccctggaagagctcatcctggtgggcaatcgcttcaac
tgctcctgcgatctccgctggctgcagctctggcagaacgggagccgagccgcgctgggc
aaccagacgctggactgctgggagggcaacgtcccggtccccttgggcaaccgggctctc
cagggctgtgagctcccgagcatccgcatcgagcaccccgaggtggttctgcgccaaggg
gacaacgtcaacctcacctgcctcatcgccgccgagccgccggccagcggggagtgggtc
ctcccggacgtcggagctgagctgcatgtggtcaccaagctctccaattgggagatcgtc
ttggagctcatcaacatctcctccaagctcaaccataaagacctgacttgccgggcagag
aatgcggtggggccggcggaggacagcgtgacattgaatgtcaccttccctcccgtgatc
gtcctcctgcaggaagccatctcccagcacgtctggtgcatccccttctcggtggacggc
aaccccgtccccaccatccgttggctcttcaacggcaccgccttgaccgagggacgctac
atccacaccagcattatggagtacgagcaaaactccaccgtcctccatggttgcctccaa
ctcaaccgtcccacccacgtcaacaacggcaactacaccctcttggtccacaatgctttg
ggctcggccgcccgcagcgtccaaggggtcttcatgaagaaccccttcagcttcaaccct
gaggaacccatccctgtgtctctgtctccactgggcaccaggaacagttcgctggagggg
cctgtggagaccaccgaggagcacacctttggggtctcggtggccgtggcactggccatc
ttcgcctgcctcttcctctccgtcatgctcatcgtgctcaacaagtgcgggcgacgctcc
aagttcggcattaaccgctcggtggtgctggcccaggaggacgacttggccgtgtccttg
cacttcatgaacctgagccccgtctcctcggccgagagcaaactggaagggttgaagagc
aacttcatcgagaaccctcagtacttctgcgatgcctgtgtccaccacgtgcagagacgg
gacatcgtgctcaagtgggagctgggagaaggtgcttttgggaaggtcttcttggctgag
tgctacaacctcctcccagagcaggagaagatgctggtggccgtgaaggcgctgaaggag
gtgacggaaagcgcccgcttggatttccaccgcgaagctgagctgctgacggtgctgcag
cacgaacacatcgtcaagttctacggtgtctgcacggaaggtgaacccctcatcatggtc
ttcgagtacatgaaacacggcgacctcaaccgcttcctcaggtcccacggccccgacgcc
aagatcctggaccaggggcaggggcagccctgcgggcagctggcgctcagccacatgctg
cagatcgccacgcagatcgcctcgggcatggtctacctggcttccctccatttcgtccac
cgcgacttggccactcgcaattgcctggtgggacacgacctggtagtgaagatcggggat
ttcgggatgtcccgggatatctacagcaccgattattatcgggtggggggcaggaccatg
ctgcccatccgttggatgcccccggagagcatcctctaccgtaaattcaccaccgagagt
gatatctggagcttcggtgtggtgctctgggagatcttcacctacgggaagcagccctgg
taccagctctccaacaccgaggcgatcgagtgcatcacgcagggacgagagctggaacag
cctcggacgtgtccctctgaggtttatgccatcatgcagagctgttggcagagggaaccc
cagcagcgccgacccatcaaggagatccacagctgcctccaggccctcgttaagaccccc
cccgtctacctggacatcctgggctga
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