Cuculus canorus (common cuckoo): 104057146
Help
Entry
104057146 CDS
T08597
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104057146 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104057146 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104057146 (NCOR1)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104057146 (NCOR1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
104057146 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DUF7952
Motif
Other DBs
NCBI-GeneID:
104057146
NCBI-ProteinID:
XP_053940851
LinkDB
All DBs
Position
20:3995413..4060865
Genome browser
AA seq
2535 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDS
HFQRVSAATVLPLVHPVQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLS
KEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQ
IIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRN
HARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQE
RFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKF
INMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLY
YYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKSEKKEEEKKDE
EEKDEKEESKENTKEKDKTEVAPEEPEEREQATPRGRKTANSQGRRKGRITRSMTNEAAQ
ASAAAAAATEEPPPPLPPPPEPSSAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVG
TKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIE
ASNEEENPEDSEGAENSSDTESAPSPTPAEPAKPSEETPSESAAAKVTTEATAEQESTVK
PAASASPSSAAPTVSTAESQIPEPQVKEEINNEAEEPMEVDNRSHPVEAKPVITLPVHTK
VEPVETEMRLPENIQVKIESDTKERDMEKPKEKSEPEEMDYSLAQQVNTARQESHSDNDS
SATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPP
MVSCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKS
PNVEWEGKPVAYMPYAEVKRAIEQEAQVQNTATRSASPYRLSPREVNKASPQPDMNAARY
SVPPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGT
PGTYLTSHSQASYTQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEG
LLVRAQHESVVRGTATIQEGSITRGTPTSKVSVETIPSLRGSITQGTPALSQSGIAADAL
LKGTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDTIKNVREGTRSPRTAHEIG
LKRSYDTMEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPR
ATAESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQ
ESRKTPEMVQTTRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEM
VPENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDANAR
RTPVNYQSPMSRSSPMMNRVSEAGISSGKPANHERKNTLTPTQRESVPAKSPVPGVDPVV
THSPFDPHHRGATPEVYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQL
YAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTIL
VPHPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAERERERERE
KERERERERERERERERERERERIASVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQE
NILQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALV
DAAASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTEQQQIEQKTLEVEKRPVQCPYTSA
NYSGGKSQGQSSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASD
KDARDRGSQSSDSSSSLSSHQYEAPGDAIEVISPANSPVPTQEKLPPYQQETPKPSQAEG
DPNRQYEGTIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFA
RNQAASQASLQPPTTTFQNSTPAPSPVSTRAKTSNRYSPESQSQPVHHQRPSARVSPENL
SDKSRGRPGKSPERSHVSSEPYEPISPPQVPVVHEKQENVLLLSQRAEPTEQRTDSRSPG
SISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGA
VSSRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQSIAVAPGSSSAAVSASNE
PRREEANPSPNSGGGVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQ
TPVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHQQNRIWEREPA
PLLSAQYETLSDSDD
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttccggctaccctcctaaccaaggagcattcagcacagaacagagccgttac
ccaactcactctgtccagtacaccttccctagcacccggcaccagcaggaatttgcagtt
cctgattatcgttcgtctcacctggaagtcagtcaggcaacccagctcttgcagcagcag
caacagcagcagcagcaacttcggcgcaggccttccttgctttctgaattccacccaggg
tctgacaggcctcaggaaaggagaactggatatgaacagcagtttcacccaggtccatct
cagacagatcatgattcactggaatctaaacgaccacgtcttgaacaagtctccgattct
cattttcagcgtgtcagtgcagctactgtcttgcctttagtacatcctgtgcaggaaggg
ttgagatctgcagatattaagaaggacccggcttttggaggaaagcatgagggaccatct
tctccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttcaaagctgtcg
aaggaagaattgatacagagcatggaccgcgtagatcgtgagattgcaaaagtcgaacag
caaattcttaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctccc
gagccagagaggcctgtctcccctcctccagtggaacagaaacaccgcagtattgtccaa
attatttatgatgaaaatcggaaaaaagcagaagaagctcacaagatttttgaaggtctt
ggtccaaaagttgaactgccactttacaaccagccatcggacacaaaggtctaccatgaa
aacatcaaaacaaaccaagtgatgaggaagaagctgatactgttctttaaaagaagaaat
catgcaagaaaacaacgggaacagaaaatctgtcaacgttacgatcagctgatggaggca
tgggagaagaaagttgacagaatagaaaataatccacgcaggaaagctaaggagagcaaa
acaagagagtactatgaaaaacagtttccagagatccgcaagcaaagagaacagcaagaa
cgattccagagagttggccaaagaggggccggactttcagcaactattgctagaagtgaa
catgagatctctgaaatcattgatgggctttctgagcaggagaataatgaaaaacaaatg
cgtcagctctctgtcattcctcccatgatgtttgatgcggaacaaagacgagtgaagttt
attaatatgaatggtctgatggaggatcccatgaaagtttataaagacagacagttcatg
aatgtctggaccgaccacgagaaagagatttttaaggaaaagtttgtccaacatcccaag
aactttggtctaattgcttcctacctggaacggaagaatgttcccgactgtgtattatat
tattatttgaccaagaaaaatgaaaattataaggccctcgtgcgaaggaattatggtaaa
cgcagaggaagaaaccagcaacagattgctcgtccttctcaagaagaaaaggtagaagaa
aaggtagaagaggaaaaagcagaaaaatcagagaaaaaagaggaggaaaagaaagatgag
gaggaaaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaa
gttgcaccagaggaaccagaggaacgggagcaggctactcctaggggccgaaaaactgcc
aatagtcaaggtcgtcgcaagggcaggatcaccagatcaatgacaaatgaagcggcacaa
gccagtgctgctgcagccgcagccactgaagagccaccaccgcctcttccacctccacca
gaaccttcttctgcagagcctgtggagacatcccgctggacagaggaagaaatggaagtt
gctaagaaaggcctagtggaacacggacgaaactgggcagcaattgccaaaatggttggg
acgaaaagtgaagctcagtgtaagaacttctacttcaactacaaaaggagacacaatctg
gacagcctcctccagcagcacaaacagaagtcttcacgaaggccccgtgaggagcgtgat
gtatcgcagtgtgagagcgtggcttcaactgtgtcagctcaggaggatgaagatattgaa
gcatccaatgaagaagagaatccagaagacagtgaaggtgccgagaatagttctgataca
gaaagtgctccatccccaactccagcagaacctgctaaaccaagtgaagaaactccatct
gagagtgctgctgcgaaagtaaccactgaggctacagcagaacaagaatctactgttaaa
cctgcagccagtgcatctccctcctctgcagccccaactgtatcaacagctgaaagtcag
attcctgagccgcaggtgaaggaagaaataaacaatgaggctgaagagcccatggaggtt
gacaataggagtcatccagttgaagctaagcctgtgataactctgccagtgcataccaaa
gtagaacctgtagagactgagatgaggctaccagagaatattcaagtgaagatagagagt
gataccaaagagagggatatggagaaacccaaggaaaagtcagaaccggaggaaatggac
tatagtctggcacagcaagttaatacagcaagacaagaatcccattcagataatgattca
agtgccacctgtagtgctgatgaggaagtagatggagagcctgacagacaaggtatcttc
agcagggagtcgaagccctcactgttaaatcccactgggtcaatactggtatcatccaca
ataaagcaagggcagatggatttgcaacaacttcaccaccgagctgctgtcataccacct
atggtttcttgcagtccctgtactgttcctgttggaacaccagtgagtggttatgcgctg
tatcaacggcacattaaagcaatgcatgagtcggcactgctggaggagcaacgccagagg
caagagcagctggatatggagtatcgaagtgctgtaagcccttgtggcacttccaagagc
cctaatgttgagtgggaagggaaaccagtggcctacatgccttatgctgaggtcaaacga
gcaatagagcaggaagcacaagtgcaaaatacagccacaaggtcagcgtcaccgtacagg
ctgtctccgagggaagtcaataaagcctctccccagcctgatatgaacgcagctcgctat
agtgtcccgccagttctccagccagcacctcaccaagtaataacaaatatacctgaagga
gtccgccttccaacaaccagacccaccagaccaccgccaccgctcattccatcctccaaa
acaagcgtgccatcagaaaaaccgtcctttatcatgggtggctcaatctcacaaggaaca
cctggcacttacttaacatcccatagtcaagcttcctacacccaagaaactgcaaagcca
tcagtgggttctatatctctcggactgccaaggcagcaggagtcagccaagtctgcttcc
ctgccctatatcaaacaagaagaattctctcccagaagtcagaattcccaacccgaggga
ctcctagtcagagcacaacatgaaagcgtcgtccgaggtacggccacgatacaggaggga
agtataacacgagggactccaaccagtaaagtttctgttgagaccattccttctttgaga
ggctccataactcagggtacaccagctctgtcccagtctggcatagcagccgatgcgttg
ttgaagggaactatcacacggctggctacggaagacagcagcccagaaaagtgccgagag
gaagcttcagccaaaggccatgttatttatgaaggcaaaagtgggcatattttatcttac
gatactattaaaaacgttcgtgagggaacaaggagtccaagaactgctcatgaaattggt
ttaaagagaagctatgatacaatggagggaaatataaagcaaggaatgtcaatgcgggag
tctccagtgtctgcaccactggaaggtttaatatgccgtgcactgcctaggggtagccca
catgctgaactaaaagagagaacagtgttgtctggctctataatgcaaggtacaccaaga
gcaacagcagaaagttttgaagaaggcttgaaataccctaaacagattaagagagagtca
cccccaataaggacattcgaaggagccattactaaggggaaaccgtatgatggagtcact
accataaaagaaatgggccgttccatccatgaaatcccaagacaggacctattaagccag
gagagccgcaagactcctgaaatggtgcagacgaccaggccaatcatagaaggctccata
tctcagggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaat
gtcaaatctttaatcactggaccaagcaagctcccccgtggaatgcctcagctggaaatg
gtgccagaaaacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggat
gcagtacgttcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtcaact
cttcatgaaactcctaaatcacagctgagccctgggatttatgatgatgccaatgctcgg
agaacacctgtgaactatcagagtccaatgtccaggagttcacccatgatgaatagagtt
agtgaggctggaatatcttctgggaagccagcaaatcatgaaaggaaaaacacacttact
ccaacgcagagggagagcgtgccagcaaaatctccagtcccaggggttgatcctgtagtg
actcacagtccttttgaccctcatcacagaggagcaactcctgaagtctataggagtcac
ctccctcctcatttagatcctgctatgccatttcacagggctctggatcccgctgctgct
gcttacctgttccaaaggcagctctcacccacccccggctacccaagtcaatatcagctt
tatgcgatggaaaacacacgacagacaatcctaaatgactacattacctcacagcagatg
caagtcaatttacgtcctgatgtaacgagaggattatcacctagagaacaaaccttagct
ctcccgtatgccggagcaaggggaattattgacctaaacaatatggctcccactatctta
gtgcctcatcctggaggaacaagcacaccacctatggagagaatcacgtatatccctggt
acccagcttacattccctcccaggccttataatcctgcttctctgtcaccaggacaccct
acgcacctggcagcttctgcagctgcaaatgctgaaagagaacgggaaagggagagggaa
aaggaacgagaaagggagagggaacgtgagcgagagcgggaaagagaacgagaacgagag
agggagagaatagcttcagtccctgctgaactttatcttcgaccaggtgcagagcagcct
ggcagacctggcagtcatggatatgttcgatccccatccccttcggttagaagccaggag
aacatactgcagcaaaggcctagtatttttcaaggaaccaacgggacgagtgtaatcaca
cctttggatcctgctgctcagctacgtatcatgcagctcactccgggagctccctctatt
actcaagggttgccagcttcccgttacaatactgctgctgatgccctcgcggcactggta
gatgctgcagcctctgctcctcagatggaagttgccaaagcaaaagagaacaagcacgaa
ggaaccaggatagaagagaatatgggacgtcggtcagctgtggttactgaacagcagcag
atagaacagaagacactggaggtagaaaagaggcctgtccagtgcccctatacgtctgca
aattattctggtggcaagtcccagggacagtcttcatcagtagtctattcagaggctggt
aaagagaaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaag
accacaattactgctgctaacttcatagatgtgatcatcactcgacagattgcttcagac
aaggatgcacgagataggggctctcaaagttcagattcttccagtagtttatcctctcac
cagtatgaagctcctggagatgccatcgaggtgattagcccagcaaactcacctgtacct
actcaagaaaagctaccaccctaccaacaagagacacctaaaccaagtcaggcagagggt
gacccaaacaggcagtatgaggggacgattcaccgctacaggacacaacaggaaccccct
tcaccccagcaaccaccacctccctcttcccaagcagaagggatggcacatgtgcccagg
acccatcgacttatcaccctggctgatcacatctgtcaaattattacgcaagactttgct
agaaaccaagcagcttctcaggcttctttgcagcctcccaccactacattccagaattcc
acccctgctccatcgcctgtttctacccgggcaaagacatccaatcgctacagccccgag
tcacagtcacagcctgtccatcatcagcggccaagtgcgagagtgtcacctgaaaatctg
tctgacaagtccaggggaagacctggaaaatctccagagaggagtcatgtctcttcagag
ccctatgagccaatctcgccacctcaggtcccggttgtacatgagaaacaagaaaatgtc
cttttgctttcccaaagagctgagcctactgaacagaggactgactctcgctctccaggc
agtatcagctacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtaaaa
tccaagaaacaggagatatttcgaaagctgaactcatctggtggtggtgactctgacatg
gcaactgctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgca
gtcagttctaggggtcattcctttgcagatcctgccagtaatctgggtctggaagacatt
attaggaaagcgttgatgggaaactttgatgacaagagtgaggaacatggagttgtaatg
tcacagtccattgcggtagcacctggcagttccagtgctgcagtatcagcaagtaatgag
ccgcgtagggaagaagctaatccatcaccaaattcaggagggggagtcagcaagcagaaa
ctcatcggcaagtcaaacagtaggaagtctaaatctccgattcctggacagggatatttg
ggaactgaaagaccttcttctgtctcatctgtacattcggaaggggactaccacagacag
actccggtgtgggcctgggaagacaggccttcatcaacaggttcgacacagtttccttac
aacccgttgacgatgaggatgctcagcagtaccccgccaacatcgattgcatgtgccccg
ccgtccatgagccaagcaaccactcaccaacagaacaggatatgggagcgagagcctgcg
ccgctgctttcagcacaatatgagactctgtctgacagcgatgactga
DBGET
integrated database retrieval system
