Cuculus canorus (common cuckoo): 104057148
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Entry
104057148 CDS
T08597
Symbol
UBB
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03320
PPAR signaling pathway
cuca04120
Ubiquitin mediated proteolysis
cuca04137
Mitophagy - animal
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104057148 (UBB)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104057148 (UBB)
04137 Mitophagy - animal
104057148 (UBB)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
104057148 (UBB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104057148 (UBB)
Ubiquitin system [BR:
cuca04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
104057148 (UBB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
104057148
NCBI-ProteinID:
XP_053940811
LinkDB
All DBs
Position
20:complement(3919216..3921489)
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagt
gacaccatcgagaacgtgaaggccaagatccaggacaaggaaggcattcctcccgatcag
cagaggctgatctttgccggcaagcagctggaagacgggcgcaccctgtctgactacaac
atccagaaggaatccaccctccatcttgtcctgcgcctgcgtggtggcatgcagatcttt
gtgaagaccctgacaggcaagactatcacccttgaggtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggaggggatcccccctgaccagcagaggctgatc
tttgccggcaagcagctggaggatggacgcaccttgtctgattacaacatccagaaggaa
tccaccctccaccttgtcctgcgcctgcgtggtggcatgcaaatcttcgtgaagaccctg
acaggcaagaccatcacccttgaggtggaacccagtgacaccatcgagaatgtgaaggcc
aagatccaggacaaggaggggatcccccctgaccagcagaggctgatctttgctgggaag
cagctggaagatgggcgcaccctctccgattacaacatccagaaggaatccaccctccac
cttgtcctccgcctgcgtggtggcatgcagatctttgtgaagaccctgactggcaagacc
atcactcttgaggtggaacccagtgacaccatcgagaatgtgaaggccaagatccaggac
aaggaggggatccctcctgaccagcagaggttgatctttgccggcaagcagctggaagac
gggcgcaccctgtctgactacaacatccagaaggaatccaccctccatcttgtcctgcgc
ctgcgtggtggcatgcaaatcttcgtgaagaccctgactggcaagaccatcactcttgag
gtggaacccagtgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcatt
cctcccgatcagcagaggctgatctttgccggcaagcaactggaagatggacgcaccctg
tctgactacaacatccagaaggaatccacccttcaccttgtcctgcgcctgcgtggtggc
atgcagatctttgtgaagaccctgacaggcaagaccatcacccttgaggtggaacccagt
gacaccatcgagaatgtgaaggccaagatccaggacaaggaggggatcccccctgaccag
cagaggctgatctttgccgggaagcagctggaagatgggcgcaccctctccgattacaac
atccagaaggaatccaccctccaccttgtcctgcgcctgcgtggtggctgttaa
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integrated database retrieval system