Cuculus canorus (common cuckoo): 104057167
Help
Entry
104057167 CDS
T08597
Name
(RefSeq) pinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cuca04030
]
104057167
G protein-coupled receptors [BR:
cuca04030
]
Rhodopsin family
Vision
Opsin
104057167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7tm_4
TAS2R
DUF6123
7TM_GPCR_Srh
Motif
Other DBs
NCBI-GeneID:
104057167
NCBI-ProteinID:
XP_053941210
LinkDB
All DBs
Position
20:complement(3320660..3324602)
Genome browser
AA seq
353 aa
AA seq
DB search
MSSANSSQELPNNRTPGPFDGAQWPHQAPRAMYLSVAVLMGTVVVSASVLNGLVIMVSIR
HKKLRSPLNYILVNLAVANLLVTLCGSSVSFSNNINGFFVFGKQMCELEGFMVSLTGIVG
LWSLAILAFERYVVVCRPLGGFRFQHRHAVSGCAFTWGWSLLWTTPPLLGWSSYVPEGLR
TSCGPNWYTGGSNNNSYILALFTTCFLMPLSLILFSYTNLVMTLRAAAMQQQESDTTQQA
EREVTRMVIVMVLAFLICWLPYTTFALVVATSKDITIQPALASLPSYFSKTATVYNPIIY
VFMNKQFQSCLLKMLCCGYHPRGTGKTAPAALGPHAGVAADGLWNKMTPSHPV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgctaacagctcgcaggaactccccaacaacaggaccccggggcctttcgat
ggcgcccagtggccccaccaggccccccgggccatgtacctgtcggtggccgtgctgatg
ggcaccgtggtggtctccgcctcagtgctgaacggtttggtcatcatggtttccatcagg
cacaagaagctccggtcgcccctgaactacatcctggtgaacctggccgttgccaacctg
ctggtgacgctctgcggcagctccgtcagcttctccaacaacatcaacggcttcttcgtg
ttcggtaaacagatgtgcgagctggagggcttcatggtctccctgacaggcatcgtgggg
ctgtggtcactggccatcctggcctttgagcggtacgttgtggtctgcagacccctggga
ggctttcggttccagcaccgacacgccgtcagcggctgcgccttcacctggggctggtcg
ctactctggaccaccccaccgctcctgggctggagcagctacgtgcctgaaggtctgaga
acctcctgtgggcccaactggtacactggtggcagcaacaacaacagctacatcctggcc
ttgttcaccacctgcttcctgatgcccctcagcctgatcctcttctcctacaccaacctg
gtgatgaccttgcgagcggctgcgatgcaacagcaggaatcggacacgacgcagcaggca
gagcgggaggtgacgcgcatggtgattgtgatggtgttggccttcctcatctgctggctg
ccctacacaacgtttgccctcgtggtggccaccagcaaggacatcaccatccaaccggct
cttgcatccctgccctcctacttctccaaaactgccacagtttacaatccaatcatctat
gtcttcatgaacaaacagtttcagagctgcttgctgaaaatgctgtgctgtggttaccac
ccacgggggacaggaaaaacagctccagctgcgctcggaccccacgcaggcgtcgctgcg
gatgggctgtggaataagatgacaccatctcaccctgtctaa
DBGET
integrated database retrieval system
