Cuculus canorus (common cuckoo): 104057173
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Entry
104057173 CDS
T08597
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04142
Lysosome
cuca04144
Endocytosis
cuca05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104057173 (CLTC)
04142 Lysosome
104057173 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104057173 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104057173 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104057173 (CLTC)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104057173 (CLTC)
Exosome [BR:
cuca04147
]
Exosomal proteins
Proteins found in most exosomes
104057173 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
104057173
NCBI-ProteinID:
XP_053940901
LinkDB
All DBs
Position
20:complement(2994218..3027428)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAIGNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctaggaatc
aacccagctaacatcgggttcagcactctcacaatggagtctgacaagttcatctgcata
agagagaaagttggagaacaggctcaagtggtgatcattgacatgaatgatcccagcaac
cctattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcactaaaagctgggaaaacacttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacggatgatgtcaccttctggaagtggatctctctgaacactgttgcc
cttgtaacggataacgcggtctaccattggagcatggagggcgagtcccagcctgtgaaa
atgtttgatcgccattctagtcttgctggctgccagatcatcaactaccgcactgatgcg
aagcagaaatggctattgctgactggcatatctgcacagcaaaatcgtgttgtgggagcg
atgcagctatattctgtagatagaaaggtgtcacagcccattgagggacatgcagctagc
tttgcgcagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaagttggcacaccacctactgggaat
cagccatttccaaagaaagcggtggatgtcttctttcctcctgaagcgcaaaatgacttt
cctgttgccatgcagatcagtgacaagcatgatgtggtgtttctcataacaaaatatggc
tatatccacttgtatgatctggaaaccggcacctgtatctacatgaacagaatcagtggg
gagaccatatttgtaactgcacagcatgaagcaacagctggaattattggagtaaacaga
aaaggacaagtgctgtcagtgtgtgtggaagaggagaatattattccctatatcacaaat
gtgctgcagaatccagacctagctttacgaatggctgtccgcaacaacctggcaggtgct
gaggaactctttgcccgaaaattcaatgcgctgtttgcacaagggaactattcggaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacggcgg
ttccagagtgttccagctcagccgggacagacttcccctttgctccaatactttggcatt
ctgcttgaccaagggcagctgaataagtatgagtcgctggaactctgcagaccagtgctt
cagcagggacggaaacagctcttggaaaaatggttaaaagaagataagctggaatgctca
gaggagttgggagaccttgtgaaatctgtagatcctacgctagcacttagtgtctatctg
agagccaacgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttctgtatgctaagaaggttggatatactccagactggatatttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcccaaatgcttgttcaagatgaa
gagcctcttgcagatataacacaaattgtggatgtctttatggaatataatttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacgcgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctacagagagcgctcgaacacttcacagacttgtatgacatcaagcgtgcagta
gttcacactcaccttcttaatcctgagtggttagtgaattattttggttccttatcagta
gaagactctctggagtgtctgcgtgctatgttgtctgctaacattcgtcagaacctgcag
atctgtgtccaagtagcttcaaaataccatgaacaactgtcaacacagtcacttattgag
ctgtttgagtccttcaagagctttgaaggtttgttttacttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcgtgcaagactgggcaa
attaaagaagtggaaagaatctgcagggaaagtaattgctatgatccagaacgcgttaaa
aacttcctcaaggaagctaaactcacggaccagttgccactcatcattgtatgtgatcgc
tttgactttgtccacgacttggtgctgtacttgtatcgaaataatctccaaaaatatatt
gagatatatgtacagaaggtgaatccaagccgtttgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggtcaattt
tcaactgatgagctggttgcagaggttgagaaaagaaacaggctgaaactgcttctgccc
tggctggaagcaagaattcacgagggttgtgaggagcctgcaactcacaatgcattggcc
aaaatatacattgatagcaacaacaacccagaaagattcctgcgtgagaatccttattat
gatagtcgcgttgtcggcaagtactgtgagaagagggaccctcacctggcctgtgtggcg
tatgagcgtggacagtgcgatttggaacttattaatgtctgcaatgagaactccctcttc
aaaagtctttctcgatacttagttcgccgtaaagaccctgaactgtgggccagcgtacta
ctggagagcaacccttacagaagaccgctaattgatcaggttgtacagactgcactgtcg
gagacacaagaccctgaggaagtctctgttactgtgaaggccttcatgactgcagatctt
cctaatgagcttattgaactgctggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctcattctgacggctattaaggctgatcgcacccgtgtc
atggagtacatcaatcgcctggataactatgatgctccagacatagccaatatagctatc
ggcaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcgtatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtgaaggaagcaattgactcgtatattaaagcagatgatccttcctcctacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaagtacctccagatggca
cgcaagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctagcggagctagaggagttcattaatggacccaacaatgcacatatccagcaa
gttggtgatcgctgttatgatgaaaagatgtatgaagcagctaagttgttgtataacaat
gtgtccaactttggccgtttagcctctactttagttcacctaggtgaataccaggcagct
gtggatggtgctcggaaagcaaacagtactcgcacatggaaagaggtctgctttgcttgt
gttgatggaaaagagttccgcctggcccagatgtgtggtctccatattgtagtgcatgca
gatgagctggaagaactaatcaactattaccaggatcgtggctactttgaagagctgata
actatgttggaagcagcgcttggacttgagcgagcacacatggggatgtttacagagcta
gcaattctctactccaaattcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaggcccatctctgggctgaa
ctggtgttcttgtatgacaaatacgaagaatacgataacgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctctattacaaggcgattcagttctatttggaattcaaacctctgctgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcaacttcttcaca
aaggtcaaacagctacccctggttaagccttacttgcgctctgttcagaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgataacatttctcttgctcaacgtttggag
aaacatgaactaatagagttccgaagaattgctgcatatctcttcaaaggaaacaatcgc
tggaaacagagtgtagaactctgtaagaaagacagactctataaggatgcaatgcagtat
gcttcagaatccaaagatactgagttggcagaagagctgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgcctcttcacctgctatgatctcctaaggccagat
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcttcagagtctttgagaaaggaagaggagcaagctacggaaacacaacctattgtt
tatggtcagccacagctcatgttgacagcgggacccagtgtggcagttcctccacaagca
ccttttggctatggctacaccgcacctccgtatgggcagccgcagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
