Cuculus canorus (common cuckoo): 104057262
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Entry
104057262 CDS
T08597
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03430
Mismatch repair
cuca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104057262 (MLH1)
03460 Fanconi anemia pathway
104057262 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104057262 (MLH1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104057262 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104057262
NCBI-ProteinID:
XP_009556932
UniProt:
A0A091FJK2
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Position
2:complement(111040183..111060327)
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AA seq
749 aa
AA seq
DB search
MAGAIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAYRASYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVGRY
AIHNSGISFSVKKQGDTVSDIRTLSNASTVDNIRSIFGNAVSRELIEVGCEDASLAFKMK
GYITNANYSVKKCTFLLFINHRLVESAALRKAIETVYAAYLPKSTHPFLYLSLEITPQNV
DVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGAECSSSEAVKPA
ANTSASTKGTSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSTGPTEVTTEVNAGPPEGAV
RPQDAEMEDVSDVIEMANVQEDAVKPGGLSESGHLSPEKAPPRKRLREDMDIEMEKDDTR
KDMTAACTPRRRIINLTSVLTLQEEISNQAHASLQEMLHDHSFVGCVSPQWALAQYQTKL
YLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGL
AEYIVEFLKKKTEMLKDYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPMFILRLATEVNWD
EEKECFESLSKELAMFYSIRKQYITDEANLTDSQNEDSNSGSKTWKWTVEHVLYKAFRTH
LLPPKHFTEDGNILQLANLPDLYKVFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccatccggcggctggatgaagccgtggtgaaccgcatcgcggccggcgag
gtcatccagaggccggcgaacgccatcaaggagatgatcgagaactgtttggatgctaaa
tctacgagtatccaggtcgtggttaaagaaggcggtctgaagcttatccaggtccaagat
aatggctgtggtatcagaaaagaagatctggacattgtatgtgagagatttactacgagt
aaactgcaaaaatttgaagacttggctagtatttctacatatggttttaggggtgaggca
ttggctagcatcagtcatgttgcccatgtaacggtcacgactaaaacagcggatgcaaag
tgtgcgtacagagcttcttatagtgatggaaaaattaaagcccctccaaaaccctgtgct
ggaaaccaaggaactcagatcactgttgaagatctcttttacaatgtaaatacaaggagg
aaagctttaaaaaatccaaatgaagaatatgcaaaaatactagaagttgttggcaggtat
gccatccataactcgggcatcagcttttcagttaaaaagcaaggtgataccgtgtcagat
attaggaccttatcaaatgcctcaacagtggacaacattaggtccatctttggaaatgct
gttagcagggaactgatagaagtgggttgtgaagatgcaagtctggcctttaaaatgaaa
ggctacatcacaaatgcaaactactctgtgaagaaatgtacatttttactcttcataaac
catcgattggtagagtcagccgctttgcggaaagccatagaaactgtgtatgctgcttat
ttgccaaaaagtacacatcctttcctatacttaagcctggaaataaccccccagaatgtg
gatgtgaatgtgcaccctacaaaacatgaggtccatttcctccatgaagacagtatttta
gagcgtgtgcaacagcacatagagagcaagttattgggctctaattcttcaaggatgtac
ttcactcagacattgcttccaggggctgaatgttcttccagtgaggctgtaaaaccagca
gcaaatacttctgcgtctaccaaaggaaccagtgataaagtttacgcacatcagatggtc
cggactgattcccgagagcagaaattggatgcttttcttcagccagtgaacaatccccta
agtacaggccccactgaagtgacgacagaggttaatgcaggacctccagaaggtgcagtc
aggccacaggacgctgagatggaagatgtcagtgatgttattgaaatggctaatgttcag
gaggatgcagtgaagcctggggggctgagtgagagtggacatttgtctcctgagaaagcg
cctcctcgaaagagactgcgggaagacatggacatagaaatggagaaagatgacacgaga
aaggatatgactgctgcctgcacccctagaagaagaatcatcaacttgaccagtgtattg
actctccaggaagaaattagtaaccaggcacatgcaagtcttcaggagatgctacacgat
cactcatttgttggctgtgtcagtcctcagtgggctttggcccagtatcagacaaaactg
tatcttctcaacacaacgaaactcagccaagaactcttctaccagatacttatttatgac
ttcgcaaactttggagtcttaagattgtctgagccagctcctttgtatgagctttcgatg
cttgctttagaggatcctgaaagtggctggacagaagaagatggcccaaaagaagggctt
gctgaatacattgtggagtttttgaaaaagaagactgaaatgttgaaagattatttttct
cttgaaattgatgaggaaggaaacctgattgggttaccacttctgatagacaactatgtt
ccaccactggaaggactgcccatgtttatccttcgcttggccacagaggtaaattgggat
gaagagaaggagtgttttgaaagcctaagtaaagaattagctatgttctactccattaga
aagcaatatataacagatgaagcaaacctgacagactctcagaatgaagattctaattct
ggttcaaaaacatggaagtggactgtggaacatgtactttacaaagcttttaggactcat
cttttacctcctaaacacttcacagaagatggcaacattttgcagcttgctaacctgcct
gacctgtataaagtttttgagagatgttga
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