Cuculus canorus (common cuckoo): 104057300
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Entry
104057300 CDS
T08597
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104057300 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104057300 (USP9X)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104057300 (USP9X)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104057300 (USP9X)
Ubiquitin system [BR:
cuca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104057300 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
104057300
NCBI-ProteinID:
XP_053911623
LinkDB
All DBs
Position
1:89526764..89637380
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQAQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKVQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASVPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISELAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNISQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctcctgtaggagggaatgacagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccacctgatgagcaggcccaaggagatgctccaccccagctt
gaagatgaggagcctgcgtttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggtcgttcctgtgttgccgaaaggggaattagaagttcttctagaagct
gctattgacttaagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatctttcacaaagatccttacagatgaggcagttagcggctgg
aagtttgagattcacagatgtattattaacaacactcatcgactagtggaactctgtgtg
gccaagctgtcccaagactggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagctcgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtggatcggcattgaatgttcagataattgcagctctcatcaagccatttgga
caatgttacgagttcctaacattacatacagtgaagaaatatttccttccaattatagaa
atggttccacaatttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctttgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgatactt
aggttgttacaaatttcgtctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagcgtgtcatattatactcatcggcatggtaatcctgaagaggaagaatgg
cttacagctgaaagaatggcagaatggatccagcagaataatattttatcaattgtgttg
agagatagtcttcatcaacctcaatatgtagagaagttagagaaaattcttcgttttgtc
atcaaagagaaagctctcactttgcaggatctcgacaacatttgggctgcacaggcagga
aaacatgaagcaattgtaaaaaatgtacatgatctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcatctgtttgattgttttaaggcaagttggacaaatgcaagc
aagaaacagcgtgagaaactacttgagttaattcgtcgtcttgcagaagatgataaggac
ggtgtgatggcacacaaagtgctgaacctcttgtggaatttggctcatagtgatgatgtt
ccagttgatatcatggaccaggcccttagtgcccatattaaaatcttagattacagctgt
tcacaggatcgagatacacaaaaggtccagtggatagatcgttttatagaagagcttcgc
acaaatgataaatgggtcattcctgcgctgaaacaaattagagaaatttgcagtttgttt
ggtgaagcgccacaaaacttgagtcaaactcagcgaagtccccatgtgttttaccgacat
gacttaatcaatcagcttcagcacaatcatgccctagtcacattggttgcagaaaatctc
tctgcctatatggaaagcatgagacagtatgctaaagagcatggggaatatgatcctcaa
actgtaagaccaggaagcagatatagtcatgtgcaggaagtacaagagcgacttaatttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacatcgcgaatagagcaatagatcttcttaaagagatctatactaatctt
ggcccaagattacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctgaaagcctcctatgatacattgtgtgtgttggatggggataaagacagtatc
aattgtgcaaggcaagaagcaatacgaatggtgagagtgctgactgttttaagagagtac
ataaatgaatgtgacagtgattaccatgaagagagaactattctacctatgtcaagagct
ttccgtggtaaacatatcacactggtagttcgttttccaaaccaaggccgacaagtggaa
gatttggatatttggtctcatacaaatgacacaattggccaagtacgacgttgtattctc
aatcgtattaaagccaatagtgcgcacacaaaagtagaactcttcattggtggtgagctg
gtggaccctgcagacgatagaaaattaatagggcagttgaatctcaaagataaaacgcta
attacggctaagcttacacagataaattctaatatgccctcaagcccagatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactacagtgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagcctaaatatgccacctcttagagatggagca
cgtgttcttatgaagctcatgccaccagataacactacggttgagaaactaagagctata
tgtttagatcatgcaaagcttggggaaagcagccttagtccatccctagattctctattc
tttggtccttctgcctcacaagtgctgtatctaacagaggtagtttatgccttgctaatg
cctgccagtgtacctctgggagaagatgccagcgacttccaatataacttcttaaaaagt
ggtggtttgcctcttgtattgagcatgctgactagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaatgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acaagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccgacttcagaatgcatgctcagaaatgtagcaattcgt
cttgcacagcaaatatctgatgaggcttcaaaatacatccctgatatctgcgttattagg
gcagtacaaaaaattgtttgggcatcaggttgtgggtcagttcagctggttttcagctca
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagcattggaggtgatgaccctgtgttttgcattgattcca
acagcactggatgcactcagtaaagaaaaggcgtggcagacatttatcattgatttgcta
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagaggcctctcctgttcttcattaccctgctgttcacagtt
ctagggagtactgcaagagagagagctaagcattctggagactacttcactctcttacga
catcttcttaactatgcttacaacagtaacatcaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaaaaggattagggatgaagtaaaaaggacaggggaaaca
ggtgtggaagaaactatcttagaaggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgagaaac
ggagaattgcctgctgagcaggccataccagtctgtagttcacctgctactattaatgct
ggctttgagctactagttgcactagcagttggatgtgtccgaaatctcaaacagatagta
gacaccttgactgaaatgtattacataggtacagcaatcactacttgtgaagcgcttaca
gaatgggaatatctaccacctgttggacctcgaccaccaaagggatttgtaggactgaaa
aatgctggtgccacttgttatatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaattgaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaatgagagtaatgttgacccacgagatgatgtgtttggttat
ccacatcagtatgaagacaaaccagcactgagtaaaacagaagatagaaaagagtacaat
attggagtcctgaggcatctccaagtaatttttggtcatttagcagcttccaggctacag
tattacgtaccaagagggttttggaaacaatttagactttggggtgaacctgtaaatcta
cgtgaacaacatgatgctttagaattttttaattccctggtggacagtttagatgaagct
ttaaaagctctgggccatccagctatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtatgaatgtgaggaatccttcacaactctg
aatgtagatataagaaatcaccaaaaccttcttgattctttggaacagtacgtcaaaggg
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgacacc
gttaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaagttcaatgattattttgaatttccacga
gagctggacatggagccttacacagtggcaggcgtagctaagttggaaggagatgatgtc
aatcccgaaaatcagataatacaaaatgaacagtcagaaaatgaacactctgggagcacg
aaataccggcttgtcggtgtacttgtacacagtggccaggccagtggtggacattattac
tcttacattatccagagaaatggtggagatggagagaaaaatcgatggtataaatttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagaaatgaaaaaccagtgtttt
ggtggagagtacatgggagaagttttcgatcacatgatgaagcgtatgtcctacagacgc
cagaagaggtggtggaacgcttatattcttttttatgaacgtatggacacgatagacaaa
gacaatgaactaataaaatatatttcagaacttgctatcaccactaaaccccatcagatt
aaaatgccatcagcaattgaacgaagtgtacggaagcagaatgtgcagttcatgcataat
cgtatgcagtacagcctagaatacttccagttcataaagaagttgcttacttgtaatagt
gtctacttaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggtcctgctagcgattggtatgatgcattatgcatcctccttcgtcacagc
aagaatgtacgcttttggtttgcacacaatgtcctttttaatgtttcaaaccgcttctct
gagtatcttttggaatgccctagtgctgaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagacggaccatgtccttcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcatttactgagagcggtacta
aatcttctgagaagagaagtgtctgaacatgggcgccatttgcagcagtatttcaatctg
tttgtgatgtatgccaatctcggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccgggtcctccaattaaataccag
tatgctgaactggggaagctgtacaccgttgtgtcacaactgatccgctgttgcaatgtg
tcatcacggatgcagtcttctatcaatggtaatcccccacttgccaacccttacggtgat
cctaatatatcacagcctataatggcacttcagcagaacgtagcagacattttgtttgtg
aggactagttacgtgaagaaaattattgaagattgcagcaactctgaagagaccatcaag
ctgcttcgtttctgctgttgggagaatcctcagttctcttccactgtcctcagtgaacta
ctttggcaggttgcatattcatatacttacgagcttcgaccatatttggatctgcttctg
caaatcctattaattgaagactcctggcaaactcacaggattcacaatgcacttaaagga
atcccggatgacagggatggattgtttgacaccattcagcgctctaagaatcactatcag
aaaagagcttaccaatgtataaagtgcatggtggctctcttcagcaactgtcctgtagcc
taccagatccttcagagcaatggagatttgaagagaaaatggacctgggcagtagaatgg
cttggagatgagcttgagcgtagaccatacactggcaatccccaatacacctataacaat
tggtctccaccaatacaaagcaatgagacatcaaatggctacttcctagagagatcacac
agtgctagaatgactcttgcaaaagcttgtgaactctgcccagaggaggaaccagatgat
cccgatgccccagatgaacatgagtcttctccacctgaagatgcccctctgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacaggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaattatgaa
ggcagtgaagaagtttccccacctcaaacaaaagattag
DBGET
integrated database retrieval system
