Cuculus canorus (common cuckoo): 104057577 Help Entry 104057577         CDS       T08597                                  Symbol PTCH2 Name (RefSeq) protein patched homolog 2   KO K11101   patched 2 Organism cuca  Cuculus canorus (common cuckoo) Pathway cuca04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:cuca00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     104057577 (PTCH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing TRA2_N Patched MMPL Motif Other DBs NCBI-GeneID:  104057577 NCBI-ProteinID:  XP_009557256 LinkDB All DBs Position 8:27274945..27296895 Genome browser AA seq 1353 aa AA seqDB search MQGEPARAAPRAARSKSPAEGRAVVQRAPLWLRARFQALLFALGCRIQRHCGKVLFVGLL VFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKQDGE NILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCV ILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAEVG QAYMERPCLDPQDPQCPNSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQEELILGGTTK DSQGKLLRAEALQTMFLLMSPRQLFEHFKDDYEIHDISWSEEKASAILEAWQRKFVEMAQ DSIPPNATQSVHAFSTTTLNDIMKSFSDVSAIRVAGGYLLMLAYACVTMLRWDCSKSQGA VGLVGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTENSQH IPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLF VFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHPGMA TSTQITTTVQAFTRCDPLGHHVVTVLPPTSQVCTSPAVLLPHTDPLGSQVFAPSSSTRDL LAQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKAVVAVLFVALLGLSLYGTT MVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAFST VKYVVREGNRDLPKMWLHYFQDWLRGLQATFDKDWQAGRITHDSYRNGSEDGALAYKLLI QTGNKKDPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPPEW IHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRHTADFVEAIESVRAICQEAAQRHGVLS YPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPWTAGIIVSILAMMAVELF GIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAPVMD GAVSTLLGVLMLASSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEASLVD NGLRLPPLEAVPPCLGARGLYVRRAPAWPATFPDPDTECYAEGVGPGSPRGPFIVPPTPA HILLEAGKDPSFPRITVLKPYKDSPDVQGKKEAPGPQPAPLLPFGELCPSPPRDHPQPCP LGTRAGPAATLPAYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPTFSHEGFADGERD CLEEPSMPSTGGTAVPDAFEMQNMGRRGAGGRR NT seq 4062 nt NT seq  +upstreamnt  +downstreamnt atgcagggcgagcccgcccgcgccgcgccccgcgccgcccgcagcaagagccccgccgag ggcagagccgtggtccaaagggccccgctgtggctgcgggcccgctttcaggcgctgctc ttcgccctgggctgtcggatccagcggcactgcgggaaggtgctcttcgtggggctgctg gtgttcggggcactggccgtggggctgcgggtggcctccatcgagaccgacatcgagcac ctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaaggagaagctg ggcgaggagtcagtctacacctcccaaatgttgatccagaccccgaagcaggacggggag aacatcctgacgcaggaggccctgcagctccacctcgaggcggccctggccgccagcaaa gtccaagtctcgctgtacggaaaatcgtgggatttgaataagatctgctacaagtcgggt gtccccatcattgagaatggcatgatcgagaggatgatagagaagctgttcccctgtgtg atcctgacgccgctggactgcttctgggaaggttccaagctgcagggaggctcagcctac ctcccgggccgcccagacatccagtggagcaacctggaccctctgcagctgatggaggag ctgggacagttcacatctctggaaggcttcaaagagctgctggataaggcagaggtgggg caagcttacatggagcggccctgcctggacccccaggacccccagtgccccaacagtgcc cccaacaagcagagtcagcagagccctgacattccagctgagctctcagggggctgccac ggcttctccaggaagttcatgcgctggcaggaagagctgatcttaggtggcacaaccaaa gactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagc ccccggcagctctttgagcacttcaaggatgactacgagatccatgacatcagctggagt gaggagaaggcgagcgccatcctggaggcctggcagaggaaatttgtggagatggcacag gattccatcccacccaacgccacacagagcgtccatgctttctccaccaccacgctcaac gatatcatgaagtccttctctgatgtcagcgccatccgggtggctggaggttacctcctc atgctggcctacgcctgcgtcaccatgctgcggtgggactgctccaagtcccaaggggcc gtgggcctggtcggggtcctgcttgtggctctctccgtggcctctggcctggggctttgc tcgctgctgggcatctccttcaatgcagccaccacccaggttctgcccttcttggctctc ggcattggtgtggacgacatgttcctcttggctcatgccttcactgagaacagccagcac atccccttcaaggagcgaacgggtgagtgcctgaagcgtacagggaccagcgtggctctc acctccgtcagcaacatgattgccttcttcatggcagccctggtgccaatccccgccctg cgcgccttctccctccaggctgcagtggttgtggtgttcaactttgccatggtgctgttc gtcttccctgccatcctaagcttggacctgcaccgccgggagaaacgccggcttgacatc ctctgctgcttctacagcccttgctcctcacgggtcatccagatccaaccccaggagctt gctgacgccaatgacaaccacgcctgccacccctccccttatgggcatcctggcatggcc accagcacccagatcaccaccactgtgcaagccttcacccggtgcgaccctttgggccat cacgtcgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgctgtcctcctg ccccacactgaccccctgggctcgcaggtcttcgccccatccagctccacgcgggatctg ctggcccagctggacgaggccaaaggtgggcgggagtgcgtccccctacccttctgccga tggagtctcgccgacttcgcccgggagaagtatgccccgctcctcctgcggacgcggact aaggccgtggtggcggtgctgttcgtggcgctactgggactgagcctctatggcaccacc atggtgcacgacgggctctacctgacggacatcgtgccacgggacaccaaggcacacgcc ttcatctcggcccagttcaagtacttctccttctacaacatgttcatcgtcaccaagggc ggctttcactacccgggtgcccaagctgccctactcagcctgcaccaggccttcagcacc gtaaagtatgtggtgcgggaaggcaaccgtgacctgcccaagatgtggctccactacttc caggactggcttcgagggctccaggccacctttgacaaggactggcaagctgggcgcatc acccacgacagctaccgcaatggctctgaagatggggcactggcgtacaagctcctaatc cagactggcaacaagaaagaccccttcaacttcaatcagctgaccacgcggcggctggtg gacgagaatgggatcatcccccctgacaccttctacatctgcctgacggtttgggccagc aatgaccccttgggctttgctgcctcccaggccaacttctaccctccaccacccgagtgg atccatgacaagtatgacaccacgggcgagaacctgcgaatcccagcagcccagccgctg gagttcgcccagttccccttctacctgagtggtctgcgtcacacagccgacttcgtggag gcgatcgagagtgtgcgggccatctgccaggaggcagcccagcgccatggggtgctgagc taccccagcggctaccccttcctcttctgggagcagtacatcggcctgcgtcactggttc ctcctggccatcagcatcctgctggcctgcaccttcctcgtctgtgccctgctactgctc aacccctggacagctggcatcattgtctccattctggccatgatggcagtggagctgttt ggcatcatgggactgatgggcatcaagctgagtgccatccctgtggtcatcctcattgcc tcagtcggcatcggcgtggagttcactgtccatgttgccctgggcttcctgacagctgct gggagcaggaatgtgcgctcagctgcagcgctggagcacaccttcgctcctgtgatggat ggtgctgtctccaccctcctgggtgtccttatgttggccagctcagagtttgacttcatc atgaggtacttctttgcagtgctcaccatcctgacactgctggggctgctcaatgggctg gtgctgctgcccgtcctgctttctgtcattgggccaccccctgaggcatccctggtggat aacggcctccgcctgcccccactggaggcagtgcccccgtgcctgggtgccagggggctg tacgtcagacgtgccccagcctggcctgccaccttccctgacccagacacggagtgctac gcggagggtgtggggccaggcagcccccgagggcccttcattgtacccccaaccccagcg cacatcctgctggaggctggcaaggatcccagcttcccccgtatcactgtgctgaagccg tacaaggacagcccagatgtccaggggaagaaggaggctcctggtccacagcctgcaccc ctactgccttttggggagctgtgcccctcaccaccccgagaccacccgcagccctgcccg ctgggcacccgagcaggccccgctgcaaccctgcctgcctacagcacccacttgcagggc cctgctggcagctacaccaccgttacagccaccgcttcagtgacagtggccctgcacccc acgctgcctggctcctaccccaccttcagccatgagggcttcgcagacggcgagcgggac tgcctggaggagcccagcatgcccagcaccggtggcaccgccgtgcctgatgcctttgag atgcagaacatgggacgacgtggggcaggtggccggcgttag

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