Cuculus canorus (common cuckoo): 104057753
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Entry
104057753 CDS
T08597
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104057753 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104057753 (PAPOLA)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104057753 (PAPOLA)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104057753 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
104057753
NCBI-ProteinID:
XP_009557468
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All DBs
Position
5:26281725..26332044
Genome browser
AA seq
738 aa
AA seq
DB search
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLPALNDSGLDLSMDSDNSTSVPSPTSA
MKTSPLNNSGSSQGRSSPAPAVTAASVTNIQASEVTVPQINSSESSGGTSNESIPQTATQ
PAISPPPKPTISRVVSSAYLLNPSPRTSGNVATKMPSLVTAVKRTSSPHKEDSPKKMKLE
EDEISEDTSCIDLNDYEKMETKEQLETEVNVNSQTETLQTTSLQAPQKTPSTDLSDIPSL
PANPIPVIKNSIKLRLNR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcccgttacaacccagggatcacaaacacagcaactgcagaagcattatggc
attacctcacctatcagtttagctgcccccaaggagtttgactgcatgctcacccagaaa
ttaatcgaaaccctgaaaccttatggtgtatttgaagaggaagaagaactacaacgcagg
attctaattttgggaaaattaaataacctggtaaaggaatggatacgggaaataagtgaa
agcaagaatcttccacagtctgtaatagaaaatgttggaggaaaaatttttacatttgga
tcctatagattaggagttcatacaaaaggtgctgatattgatgctctttgtgttgcacca
agacatgttgaaagaagtgattttttcacgtcgttttatgaaaaactgaaacaacaggaa
gaagtaaaagatctgagggctgttgaagaagcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagacctacgagacgatagcctacttaaaaatttagacattagatgtatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggtgtttcctgggctatgctagtagcaagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactcaacctacaatgtgtcagtttccacacggatggtcatggttgaggaattt
aagcaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagtgca
ccgacagaaaaacagcgactagaatgggtgggcttggtggagtcaaaaatccgtattcta
gttggaaacttggagaagaatgaattcattacactggctcatgtgaatccacagtcattc
ccagcacccaaggagaatcctgataaggaagaataccgtacaatgtgggtgatcgggttg
gtgtttaagaaaactgaaaattctgaaaatctaagtgttgatcttacctacgacattcag
tcatttacagacacagtttacaggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcaccaactgctacctaatcacgtg
cttcagaaaaagaagaagcattcaactgaaggtatcaggttgccagctctgaatgacagc
ggcctagacttgtctatggacagtgataacagcacgtctgtgccttcgcctactagtgct
atgaagacgagtccattgaacaattctggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcagcatctgtgaccaacatacaggcttctgaagtcactgtgccacaaata
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttcaccaccaccaaagcctacgatctctagagttgtttcctcagcgtatcta
ttaaatccatcaccaaggacttcaggaaatgttgcaacaaaaatgcctagtcttgtcaca
gcagtgaaaaggacatcttcgcctcataaagaagactctcccaagaagatgaaactggaa
gaggatgaaataagtgaagatactagctgtattgatttgaatgactatgaaaaaatggaa
actaaggagcaacttgagacagaagtgaatgttaattctcaaacagaaactcttcagaca
acttctctgcaagctcctcagaaaacacccagtacagacctttcagatatcccatctctc
cctgcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa
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