Cuculus canorus (common cuckoo): 104057754
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Entry
104057754 CDS
T08597
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04136
Autophagy - other
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104057754 (ATG2B)
04136 Autophagy - other
104057754 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104057754 (ATG2B)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104057754 (ATG2B)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104057754 (ATG2B)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104057754 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
104057754
NCBI-ProteinID:
XP_053922916
LinkDB
All DBs
Position
5:complement(26200177..26248555)
Genome browser
AA seq
2077 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPD
NSKSGTALEIRIERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSLFWDEFPASAKAS
PVCSSTQLATEPKLSPSWNPKIIYEPHPQLTRNLPEITPSDPVQISKLIGRMELSLTLKQ
NEVLPGAKLDVDGQIDSVHLFLSPRQVHLLLDMVAAIAGPESLSRVELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPPRGSPLTAT
VGHQTSLRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFTQIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIRVSYEQRQRTASRSFS
TDLSIGDMELLECLFSTDSHSIQPHYTELLTFHSEEGNDSHAVPCLQLHYRHSDNRGPQG
SQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHI
SLHKAFTEVFLDDSHTPANCKVSVQVTAPALNLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEFMDVEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAEAPMKFFQVSGGIDGDITS
SDNFDWPRIVLKINPLAVHSILERITAEEDEGDNNFQEEEEGGSHSLKDVCDIRRPEPSP
FSSRRVMFENEEMVMPGDVVEMTEFQDKTISNSHYVLELTLPNIHLTLPNKSFYEKLYNR
ISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVHYDDESGSEE
ETLQYYSTVDPNYRSRRRKKLDCQNKNSQSFLSILLNVTRGLVSIFTDVKQDDGSTLEGK
YGEFWLEFNSGSLFSVTKYEGFEDRHYVCLHSSSLDLYHQGMVDGVVPSSEVRLPSTIRP
HWLEPTICFSEQDSLSRTASDGVGVDCPSMLTIAVKIQSDKLESNTKEFLVAVGLRGATL
QHRVLPSGLSWHEQILYFLNITDEPVLGYNPPATLTTFHVHLWSCALDYRPLFLPVRSLL
TVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVTVNLHRDYVRVMDMGLLELTIT
AVKSDSGEERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPTKTEIKRG
VSKPKMKVETFSQTSSHGSVLAESEQQILRDLMSDAMEEIETQQTASTMKPESNGILYDR
SQTQEPSCSDLFLFPDESGNVSQDTSPTFASFTHHLMNEAMGDVPTESDDFCILFAPKVA
VAEKEEEPVIKIMVDDAIIIKENHFSQPIKKTDTSKSPLHFPVPLVRYVVKEISLIWHLY
GGRDFGTAPPTSPAKSFISPHSSPSHTPTRHGRSTPCGGRGRNPDFLMEIQLSKVKFQHE
VYPPCGTEGESNLLEQPASRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNML
TVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVDLLVTSDPEV
KKSPGAEVTCSLPRHVSSLKDPSPVISFSSHKQANENGNIDSLDVVNGDDHNFSEEVTSY
SDQPIFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHGL
LGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRI
VRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPTFIEAKKIKRFPRHR
LAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPTVVK
PFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtccatcaagaagagggcctgcaggtacctgctgcagagg
tacctgggccactttttgcaggagaagctcagcttagagcagctcagcctggatctctac
cagggcaccggctccttgacgcaagttcctctggataagtggtgtcttaatgagatcctg
gagtctgcagacgcacctctggaagtcacagatggatttatccaatcaatttctttatct
gttccatgggggtcattactacaagataactgtgcattagaagtaaaaggattagagatg
gtcttcaggccaaggccaaggcttgcatctgggtctgagcctatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttagccaaaaactgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaaatttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttagatactgttttgcgaatagaacatgtgccggac
aactctaagagtggaactgcacttgaaatccgaattgaaagaactatgtactgtgatgaa
actgcagatgagtgctctggaattaatgtacatcagcccacagcttttgctcacaagttg
ctgcagctctccggtgtctcactcttctgggatgagtttcctgcatcagccaaggcttct
ccagtgtgttcatctacgcagctggcaacagaaccaaagctttcacctagctggaatcca
aaaataatttatgagccacacccgcaattaacaagaaacttgccagaaataactccttct
gaccctgtacagattagtaagctgattggtagaatggagttgagcctaacattaaagcaa
aatgaagtacttcctggagctaagttggatgtagatggccaaatagactctgtgcatctg
tttctgtcaccaagacaggtgcatcttctgttggacatggtagcggctattgctggacca
gagagcctaagcagagtagagttgtcaaataaagacaggaagaaccggccaatgcagcaa
gaagatgagtatcggattcagatggaattgaaacgttatttaagaaaagagtctttatct
gcaggagcatcatctgaacaaagcttctatgagacagagagtgccagaacaccttctagt
cgtgaagaagaagttttcttctcaatggctgaaatggacatgtctcacagcctttcttcc
cttccacctcttggagaccctccaactatggatctagacttgtcattaaccagtacatac
acgactacaccagcaggatcaccactgagcactacagtgcttcaaccaacttggggtgat
tttcttgatcgtaacaaacaagaactacaacctccaagaggttctccgcttacagccact
gtgggtcaccagacttccttgagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagcttctttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttacccccacctgagagttcactgaatcttaacccattgacaccaatg
gctcgggatttctttacccaaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttaggtttata
ggtactggcatcagagtgtcttatgaacaaagacaaaggactgcttctcgaagttttagt
actgatttatccattggggatatggagctcctggaatgccttttttctactgactctcat
tccattcagcctcattatacagagctgctgacgtttcattctgaagaaggaaatgattct
catgctgtgccatgccttcagcttcactataggcattcagataatagaggacctcagggt
agtcaagggagactcagttccgttccacagaaagcagagctacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagacaggttaaattccttacttcaaccacag
aaactaactacagtagagatgatggcatctcatatgtatgcgtcttacaacaagcacata
agtctgcataaagcatttaccgaagtttttctggatgattcacatactcctgcaaactgt
aaagtttcagttcaagtcactgccccagcattaaatctctctgttcgcttcccaatacct
gacctgcgatcagatcaggaaagaggaccatggtttaagaaatcccttcagaaggagatt
cttcatcttgaatttatggatgtggaatttaaaactgagtttataggagggtcaactcca
gaacaagttaaattagaacttacctttaaagagctaactggctcatttgaagaagataat
gcagaagcaccaatgaagttttttcaggtgtctggtggcatagatggagatataacatca
tcagataattttgactggcctcggattgtattgaaaataaaccctctggctgtgcactct
attctggaaaggataacagctgaggaggatgaaggtgataataactttcaagaggaagaa
gaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttctcct
ttttcttctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggagatgtagtt
gaaatgactgagtttcaggataaaacaataagcaattctcactatgtactggaactcacg
ttaccaaacattcacttaacattaccaaacaaaagcttttatgaaaaactttacaatagg
atcagcaatgatttattgttgtgggaacccacagctccgtctcctgtagaaacatttgaa
aacctttcttatggtgttggactatctgtggccagccagctcatcaacactttcagtaaa
gacagctttagtcagtttaaatctgcagttcattatgatgatgagagtggatctgaggaa
gaaacgctacagtattattccactgttgatccaaactatcgttcacgcagaaggaaaaag
cttgactgtcagaataagaactcacaaagctttctgtccattctgctgaatgtgacgcgt
ggattagtgtcaatattcacagatgtaaagcaggatgatggaagtacattagaaggaaag
tacggtgaattctggcttgagttcaacagtggttcactttttagcgtgactaaatatgaa
ggctttgaggacagacactacgtttgtctccattctagcagcctcgatttatatcatcaa
ggtatggtagatggagttgtcccttcctctgaagtacgactgcccagcacgatacgcccc
cattggttagaaccaactatatgtttttctgaacaagatagtcttagcaggactgcttca
gatggcgtaggagtggactgtccaagtatgctcaccattgcagtcaaaatccagtcagat
aaattagaaagcaatacaaaggaatttctagttgctgttggactaagaggagccaccctt
cagcaccgagtactgccttcaggtttaagctggcatgaacagattttatattttttgaat
attactgatgagcctgttctgggatataatcctccggctacacttacaacttttcatgta
catctgtggagttgtgctcttgattacaggcctttgtttttgccagtgagatctctactt
actgttgaaactttcagcatatccagcagcgttgcagtggataaatcctcttctactctc
agaattattctagatgaagctgctttgcatctgtctgacaagtgcaacactgttacagtg
aacctccatagagattatgttcgtgttatggatatgggactgctagaactaaccattaca
gcagtaaaatctgattctggtgaggaaagaactaagccacgctttgagctgcactgttcc
agtgacgtaatccatatccgcacctgctctgattcatgtgctgcactaatgaatcttata
caatatattgcaagttatggtgatttacatccacccacgaagacagagattaaacgtgga
gttagcaagccaaaaatgaaggtggagacctttagccaaacatcttcccatggatcagtc
ctcgctgaatcagagcaacagattttacgggatttgatgagtgatgcaatggaagaaatt
gagactcagcagactgcttccaccatgaagccagaatccaatggaattttgtatgacaga
tctcagactcaggagccatcttgctcagatctgttcctgttcccagacgaaagtggaaat
gtctcacaagatacaagtcccacttttgcctcattcactcatcacctgatgaatgaggcc
atgggagatgttcctacagaaagtgatgatttctgcattctttttgcacccaaagttgct
gttgctgaaaaagaggaagagccggtaataaaaataatggttgatgatgcaattatcata
aaggaaaatcatttcagccagcctattaaaaaaacagatacaagcaaatctccccttcat
tttcctgttcctttggtacgctacgttgtaaaggaaatctctcttatttggcatctttat
ggtggaagagattttgggactgcaccaccaacatctccagctaaaagtttcataagtccc
catagttctccttctcatacaccaacgaggcatggacggagtacaccgtgtgggggaaga
ggaagaaacccagacttcctaatggaaatacagttaagcaaggtgaaattccagcatgag
gtataccctccatgtggtacagaaggtgaatccaacctgttggagcagccagcgtcacgg
caggtttttattgttcaggacctggagattagagatcgcttagctacatcacagatgaat
aaatttctctatctttactgcagcaaggagatgcccagaaaagctcattcaaacatgtta
acagttaaagcattacatgtccgtccagagtctggcagatcaccgcaggagtgctgttta
cgtgtttcactaatgccacttcgcctcaatattgaccaggatgccttgtttttcctgaag
gattttttcactagcctctctacagaagtagacctcttagttacttcggatcctgaagtt
aaaaagtctcctggtgctgaagttacgtgtagcttgcccaggcatgtcagcagccttaag
gatccaagtccagtgatttctttctcatcacacaagcaagcaaatgaaaatggtaacatt
gattctttggatgtggttaatggagatgatcataatttctcagaagaagtgacttcatac
agtgatcagccaatatttttcagagaatttcgttttacatcagaagttcctatacggctt
gattatcatggcaagcatgtatcaatggatcaggggactctagctgggattcttattggg
cttgcacagttaaactgctcagaattgaagctgaagagactttgttacagacatggttta
ttaggtgtcgataaattgttctcctatgccatcagtgaatggcttaatgatataaagaaa
aaccagctaccgggaattttgggaggagtagggcctatgcattcactagtgcagttagtc
caggggctgaaagacttggtgtggttaccgatagagcaataccgaaaggatggccgtatt
gtaagaggctttcaaagaggagcagcttcttttggtacttccactgcaatggcagcactg
gagctaacaaacagaatggttcagactatacaggcagctgcagaaactgcatatgacatg
gtatcaccagggcccacttttattgaagcaaaaaagatcaaacgattccctcgccatcgt
ttagctcatcagccagtagacctacgggaaggtgtagccaaagcatacagtgtagtaaaa
gagggtattactgacacagcccaaaccatctatgagaccgctgctcgtgagcatgagaac
agaggagtaactggagcagtaggaggagtcctccgccaaattccaccaactgtggtgaaa
cctttcattgtagcaacagaggcaacttcaaatgttctagggggaatgagaaaccagatc
aggccagatgtgcgtcaagaagagtctcagaagtggcgccttggggaggactga
DBGET
integrated database retrieval system
