Cuculus canorus (common cuckoo): 104057845
Help
Entry
104057845 CDS
T08597
Symbol
FXR1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104057845 (FXR1)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104057845 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
104057845 (FXR1)
mRNA cycle factors
Stress granule specific factors
104057845 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
104057845
NCBI-ProteinID:
XP_053930131
LinkDB
All DBs
Position
9:complement(17310028..17346909)
Genome browser
AA seq
677 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLVILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGETADAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRLERLQIDEQLRQIGMGFRPSSARVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDNRRRPGGRGRSMSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNPPKETLAKTKKETAKDAIDENSPSEKAVNGPATASGDEPSKLQHSPDEKKVT
VQEDGNNQEEAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgttcatgaggactcgctcacagtcgtatttgaaaacaactggcaacctgagcgc
caggtaccctttaatgaagtcagattaccaccaccccctgatattaagaaagaaattggt
gaaggagatgaagtggaggtttattctagagcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggggagttttatgtcattgagtatgctgcttgtgat
gccacttacaatgaaatcgtcacttacgaacgactccgacctgtgaatcaaaataaaact
gtcaagaagaacacctttttcaagtgcacagtggacgttcctgaagatctgagagatgcg
tgtgctaatgaaaatgcacataaagatttcaagaaagctgtgggagcatgtcgtattttt
tatcatgctgaaactgctcaactagtaatactgtctgccagtgaagcaacagtgaagaga
gtgaatatactgagtgacatgcatttgcgcagcattcgtaccaaacttatgcttatgtca
agaaatgaagaagctacaaaacatttagaatgcacaaaacagcttgctgcagcatttcat
gaggaatttgtagtcagagaagatttgatgggacttgctataggaacacacggcagtaac
atacaacaagccagaaaggttccaggagttactgccattgaacttgaggaagatactggt
actttcagaatctatggagagactgctgatgcagtaaaaaaggctagaagttacttggaa
tttgtggaggattttattcaagttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaagtctggagtcgtcagggtgagaattgaagga
gataatgaaaataaactgccccgtgaagatggaatggtaccatttgtatttgttggtact
aaagaaagcattggaaatgtccaagttcttttagaataccacatcgcatatctaaaggag
gtagaacaactaagactggaaaggctccagattgatgaacaattgcgtcaaattggtatg
ggtttcagaccttcttccgctagagttcctgaaaaagaaaagggttatacaactgatgag
agcaccctctcctcagtgcaaggttccagatcctacagcggaagagggagaggccgcagg
ggccccaattacacatctggttacggtacaaactctgagctctctaatccctccgaaaca
gaatctgagagaaaagatgaacttagtgactggtccttggcaggggaagatgacagagaa
agcagacatcagcgtgacaatagacggcgtcctggaggacgaggacgtagtatgtcagga
ggtcgtgggcgtggtggacctcgtggtggcaaatcttcaattagctctgtgcttaaagat
ccggacagcaacccttacagcttgcttgataacacagagtcagaccagactgtggatacg
gatgctagtgaatctcaccacagtagtaaccggcgcagaaggtcacgccggcgaaggact
gatgaagatgctgttcttatggatggaatgacggagtctgatacagcttctgttaatgag
aatggtttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtaacagtagctgattatatatcacgagct
gaatcacaaagtagacagagaaaccctccaaaggagacactagccaaaaccaagaaagag
acggcaaaagatgcgattgatgagaacagcccttctgaaaaggcagtgaatggtcctgct
acagcttctggggatgagccttctaaactacagcacagtcctgatgaaaagaaagttact
gttcaagaggatggaaataatcaggaagaagcagtgctgaatggtgtttcataa
DBGET
integrated database retrieval system
