Cuculus canorus (common cuckoo): 104057999
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Entry
104057999 CDS
T08597
Symbol
SIX3
Name
(RefSeq) homeobox protein SIX3
KO
K19473
homeobox protein SIX3/6
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104057999 (SIX3)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
104057999 (SIX3)
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
104057999
NCBI-ProteinID:
XP_053919911
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Position
3:100093360..100097430
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AA seq
313 aa
AA seq
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MVFRSPLELYPTHFFLPNFAADPHHRSLLLASGGSGSGSGCSPGAGGGGSSRAPHEELSM
FQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVA
FHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPL
PRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQ
RDRAAAAKNRLQHQAIGQSGMRSLAEPGCPTHSSAESPSTAASPTTSVSSLTERAETGTS
ILSVTSSDSECDV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaggtccccgctagagctttatcccacccatttcttcttgccaaacttcgcc
gccgacccgcaccaccgctccctccttctcgccagcggcggcagcggcagcggctcgggc
tgcagccccggggccggcggaggcggcagctcccgggcaccccacgaagagttgtcaatg
tttcagctgcccacactcaacttctccccggagcaagtggccagcgtctgcgagacgctg
gaggagactggagacatagagaggctggggaggttcctctggtcgctgccggtggcgccg
ggggcatgcgaggccatcaacaagcacgagtccatcctccgcgcccgggcggtggtggcc
ttccacacgggcaacttccgagacctctaccacatcctggagaaccacaaattcaccaag
gagtcccacggcaagttgcaggccatgtggctcgaagcgcactaccaggaggccgagaag
ctaaggggtcgcccgctggggccggttgataaatacagggtgaggaagaagttcccgctg
cccaggaccatttgggatggtgagcagaagacgcactgcttcaaggagaggactcgcagc
ctcctgagggagtggtacctgcaggacccttaccccaaccccagcaagaaaagggaactg
gctcaggccacggggctcacccccacgcaagtaggcaactggttcaaaaaccgaaggcaa
agagacagagcggcggcggctaaaaacaggctccagcaccaggcgataggacagagcggc
atgcggtcgctggcagagcccggctgcccgacacacagctcggccgaatctccgtccacg
gcggccagcccgaccaccagcgtctccagtttgacagaaagagccgagacgggcacctcc
atcctctcggtaacctccagcgactcggaatgtgatgtatga
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