Cuculus canorus (common cuckoo): 104058002
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Entry
104058002 CDS
T08597
Symbol
EXO1
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104058002 (EXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104058002 (EXO1)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104058002 (EXO1)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
104058002 (EXO1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
104058002 (EXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
104058002
NCBI-ProteinID:
XP_053919970
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Position
3:65397298..65428745
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AA seq
834 aa
AA seq
DB search
MRSMRIRSKITATRSKFFVDHSSLSNIMGIQGLLQFIKEAAEPTHVKKYKGQTVAVDTYC
WLHKGAYACAEKLARGEPTDLYVAFCMKLVDMLLSFGIKPILVFDGCTLPSKKEVEKARR
EKRQTNLLKGKQLLQEGRLSEARECFGRSVNITHVMAHEVIKAARVRAVDCIVAPYEADA
QLAYLNKTGMVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEVDQARLGNCKQLGNVFTEE
KFRYMCILSGCDYLPSIHGIGLAKACKLIKLANNPDIIKVIKKMGQYLKMNITVSEEYLE
GFIRANNTFLYQLVFDPINRKLIPLNAYEDDVDPETLIYAGRHFGDNTAFQIAIGNIDID
TMEQIDNYNPDAAQPVQQRSSGWNDRHANHVNSIWSRDYKLGLNTQTVNHKMHLLDKPTT
KGMEKIISVKGLKLPGKEFLAKRPRSDLEVVSDGDLMNQYSFSKAKKFKESDYDGQAQSV
SAMRSLDSSGNSVTQESSNSLPRVRNKFASFLQRKNTEKDAVIVPGTRSRFFCNDAIMCD
GRAKKDDNDLTQDAERDCQEQEIKHVGEGASPFSETEKSTRTICTAPGETQKNCFRWFSS
LVNNSGNPGPSHVFSQQFRQWRSNYVSQEDQISGVQTESRAVCDKLEEESLLLTELEQTS
QSQRCCEPSEHSLESSEISQVSNNSSDAEESDSTSKLADDQCTLSPVFSAVKTKRKNTII
KTKVPGLHKPRCIGSHIVTKLKPLIPAKVSGLSRKLSPVQKRNHCDDENKLEMQATISEL
WKNFQFKREYKKLPSCKKPDPLSPIKDNIQLTPETEEEIFNHLEHSHVQRAIFQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatgcgcataaggagcaaaataactgcaacacgctccaagttcttcgttgac
cacagcagtttaagcaacattatggggattcaaggcctgctccagtttatcaaggaagct
gctgaacctacccacgtgaagaaatacaaggggcagacagtagctgtggacacctactgt
tggctgcacaaaggtgcttatgcttgtgctgaaaagctggcacgaggagagccaacagat
ctttatgtagctttctgtatgaaacttgttgatatgctcctctcatttggaattaaacca
attttggtgtttgatggatgcactctgccttctaagaaggaagtggaaaaggcccgacga
gagaaacgtcaaacaaatcttctgaaggggaaacaattattgcaggaagggagactgtca
gaagctagggaatgttttgggcgcagtgtaaatattacccatgttatggctcatgaagtt
attaaagctgcacgagtccgagctgttgattgcattgttgctccttatgaagctgatgct
cagttggcttatcttaataagactggcatggttcaagctataattacagaagactctgat
cttttagcttttggatgtaaaaaggtgtttctgaaaattgacaagtttggaaatggatta
gaggtagatcaagctcgactaggaaactgcaagcagcttgggaatgtgtttacagaagag
aaattccgctacatgtgtattctttctggttgtgactacctcccatcaattcatggaatc
gggttagctaaagcctgcaagttaatcaaattggccaacaatccagatattataaaggtt
attaagaaaatggggcagtacttgaagatgaatataacagtatcagaagaatacctagag
ggttttatacgagccaataatacatttctttatcagttagtttttgatcctatcaacaga
aaattaattcctctgaatgcatatgaagatgatgttgatccagaaacactaatttatgca
ggacggcattttggagataatactgcttttcaaattgccattggcaacattgatattgat
acaatggaacaaattgataattataaccctgacgctgcacagcctgtgcagcagagaagt
tctggttggaatgacagacatgctaatcatgtaaatagcatttggagcagagactacaag
cttggccttaatacacagactgttaatcataaaatgcatttactagataaaccaacaacc
aaaggcatggagaagataattagtgttaaaggactaaaacttccaggcaaagagttcttg
gcaaaaaggccaaggagtgatttagaagtcgtctcggatggagatcttatgaaccaatat
tcattttcaaaagcaaaaaaattcaaggagagtgattatgatggtcaagcacagagtgtc
tcagcaatgcgaagccttgattcttcagggaattctgtcactcaagaaagctctaactcc
ctgcccagagttagaaataaatttgcttcctttctacaaaggaaaaacacagagaaagat
gctgtaattgttccaggaacaagaagcaggtttttctgcaatgatgcaattatgtgtgat
ggtagagcaaagaaggatgacaatgatctaactcaagatgctgagcgggattgccaggaa
caggaaataaaacatgtaggggaaggtgcttctcctttttcagaaactgaaaaatcaaca
aggactatctgtacagctcctggagaaacacagaaaaattgcttccggtggtttagcagc
ctcgtgaataattcaggaaatcctggtccatctcatgtgttttcacagcagtttcgccaa
tggagaagcaactatgtatcccaggaagatcagattagtggggtacaaacagagagtagg
gcagtgtgtgacaaactggaagaagaatccctcctcttaacagaactggaacaaacatca
cagtctcaaaggtgttgtgagccatcagaacacagtttggagtcttcagaaatatcacaa
gtgtctaacaacagttcagatgcagaagaatctgactctacttcaaaactggctgatgat
caatgtactctgtctccagtattttctgctgttaaaaccaaaagaaaaaatacaataata
aagaccaaggttcctggtttacataaacccaggtgtatagggtcgcatattgtaacaaag
ctcaaaccattgataccagctaaagtaagtggattaagtaggaaactgtcacctgtgcag
aagagaaatcactgtgatgatgaaaataagctggaaatgcaagccaccattagtgaactc
tggaagaacttccagtttaagagagagtacaaaaaacttccttcttgtaaaaagccagat
ccgttgtctccaatcaaagataatatacagctcactccagaaacagaagaagaaatcttt
aatcatctggaacatagtcatgttcaaagagctatattccaatga
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