Cuculus canorus (common cuckoo): 104058038
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Entry
104058038 CDS
T08597
Symbol
SRBD1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
cuca
Cuculus canorus (common cuckoo)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
HHH_6
RNase_II_C_S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
104058038
NCBI-ProteinID:
XP_053919382
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All DBs
Position
3:complement(100364281..100496718)
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AA seq
974 aa
AA seq
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MSSLPRKVKSEAKALTSKDDELPSFLNLSSESGEEEEEWEPKSKIAKRPRLPKKNEAKPK
KVAAPRSAVARKRVKKVAIKEEMDVSLPIAPAEDNKMQHLKPKEEGVGTKPKTLNQKPEV
PKKMEINSFREKSIKCLESDEKPSTSVPVVGNQVKHEKSEEDFAFDEPPFKKIKSTTSPE
GKPVKNLGGNKVKEEFEMNWDIVQALSEITNVEPWVCANLIRLFKEENTIPFIARYRKEL
INNLEADALREVQQALEELRTVAKKTHTMIQKLKKEGKLSGCLLTALLNCRTLEELDHVS
APYKTGSKGTKAQRAKQLGLEPAALSLLQNPMQLNLFSYIRPNTKGLSTIQEVEAGVQHI
LADIFAKDKDTLDFIRKLCQQRYICIQSALAKVSLKSGNEKDIDKFQLYHEFSCNIKNIQ
HHQILAINRGENLKILTVKVNIPDGVKNEFCWWCVNERWRPKQFLKPELMRILRNSVEDS
YKRLIYPLLCREFRSKLTSDAEKESVMMFGRNLRQLLLTSPVRGRTLMGVDPGYKHGCKL
AIISPTSQILHTDVVYLHSGQGFREAEKIKRLLLQYNCSTVVIGNGTACRETEAYFADLI
MKKYFAPLDVVYCIVSEAGASIYSVSPEAAKEMPDLDPNLRSAVSIARRVQDPLAELVKI
EPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEILLRHIAGLNANRAKNI
IEWREKNGPFINREQLKEVKGLGPKSFQQCAGFIRFNQEYIKTFCSSKKTELGSHAFLTK
AGAQGKKKSKPTPCAFHWPNPLDQTCIHPESYSIATRFLSFIGGNANDIGKPDMQQKVNA
VIQKEGLEGTAKRLNTTVHTLQLIIDGLTQPEGFDIRTDFDKPDFKRSIVCLEDLSVGTV
LTGKVENATPFGVFVDIGVGKSGLIPVRNITEAKLSKAKKRRSLGLGPGERVEVKVLNVD
IPRLRITLDLIHVL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctctgccaaggaaggtgaaatctgaagccaaagcccttacatcaaaagatgac
gaactaccttcatttcttaacttgagctctgaatctggggaagaagaggaggaatgggag
ccaaaaagcaaaatcgccaagagacctcgattgccaaagaaaaatgaggcaaaacctaaa
aaagtcgctgctccacggtcagctgtggccaggaaaagggtcaagaaagtagcaataaaa
gaggaaatggatgtatccttgcccattgctcctgcagaagataataagatgcaacatcta
aaacctaaggaagaaggtgtaggcactaaaccaaaaactttaaatcaaaagccagaagtg
ccaaaaaaaatggaaataaattcattccgagagaagagcataaagtgcttagagagtgat
gaaaaaccctcaacaagcgttcctgtagtgggaaatcaagtgaaacatgagaaatctgag
gaggattttgcatttgatgaaccaccttttaaaaagattaagtcgactacaagtcctgaa
ggaaagccagtaaaaaatctaggaggcaacaaagtaaaagaagaatttgaaatgaattgg
gatattgtacaggccttgtcagaaataacaaatgttgaaccgtgggtatgtgcaaactta
attcgcctctttaaagaagaaaacacaattccttttattgctcgatatcggaaagaactc
atcaataatttggaggcagatgccttgcgagaagtccagcaagcactggaagagctacgt
actgttgcaaagaagacacatacaatgatacagaagttgaaaaaagaagggaaattgtct
ggatgccttttaacagcattattaaattgcagaactttggaagaattagaccatgtgtct
gcaccatataaaactgggagtaaaggcaccaaagctcagagggccaagcaactgggatta
gaacctgctgctctctccctcctgcagaatcctatgcaactcaatctcttttcttacatc
agacccaataccaaagggctttcaactatccaggaagtagaggctggagtacagcatata
ttagccgacatctttgctaaagataaagatacactggattttatcaggaaattatgtcag
caaaggtacatttgtatccagtcagccttggcaaaagtgtccttgaaaagtggaaatgaa
aaagatattgataaattccaactgtaccatgagttttcttgcaacataaagaacattcaa
catcatcagattctggccattaaccgaggggaaaatctgaagatcctgacagtgaaggtc
aacattcctgacggggtgaagaatgaattctgttggtggtgtgtcaatgaaaggtggaga
ccaaaacaatttttaaaaccagaactgatgaggatactacggaattcagtagaggattca
tataaacgtcttatatatcctcttctctgtagagaattcagatcgaagttgacatctgat
gcagagaaagagtctgttatgatgtttgggagaaatctccggcagttgcttctgaccagc
cctgtgaggggccgtactttgatgggagtagatcctggctacaaacatggatgcaagttg
gcaattatttcaccaaccagtcagatactccataccgatgttgtttacttacattctggt
caaggatttcgtgaagctgagaagataaagaggcttctgctccagtacaactgtagcact
gttgtgattggcaatggcacggcctgcagagaaacggaagcttactttgctgacttaatt
atgaagaaatattttgcaccattggatgttgtttactgcattgtcagtgaagcaggcgca
tctatctacagcgtcagtccggaagcagccaaggaaatgcccgacctagaccctaaccta
agaagtgcagtttccatagctagacgcgtccaagacccattagctgagctagtgaaaatc
gagcccaaacacataggagttggaatgtatcagcatgatgtatcacagactttgctcaaa
gcaactctggacagtgtggttgaggagtgtgtcagctttgtaggagttgatattaacatc
tgttcagaaatactactaaggcacattgcaggactgaatgctaacagggctaaaaatata
attgaatggcgagagaagaatggaccatttataaacagagagcagctcaaggaagttaaa
ggtctgggtcccaagtccttccagcagtgtgctggcttcatcagattcaatcaagaatat
ataaagaccttctgcagtagtaagaaaactgaacttggaagtcacgcgttcttgactaaa
gcaggtgcacagggtaaaaagaagagcaagccaacaccatgtgccttccattggcccaat
cctttggaccaaacttgtattcatccagagtcttacagcatagcaacaaggtttttatca
ttcattggaggaaatgcaaatgacataggaaaaccagatatgcagcaaaaagtaaatgca
gtaattcaaaaggaaggactggaaggtacagccaaaaggctcaatacaacggtgcacacg
ctgcagctgatcatcgatggtcttactcagcctgaaggctttgacatccgaacagatttt
gataaacctgacttcaagagaagcatagtctgcttagaagacttaagtgttggtactgtt
ctgactggaaaagttgaaaatgcgacaccattcggagtatttgttgacattggtgtggga
aaatcaggtttgattccagtgcgaaacataacagaagcaaaactttctaaagcgaagaag
agaagaagcctggggttaggtcctggagaaagagtggaagttaaagtgcttaatgtcgat
attcctcgattgaggataacattggatcttattcatgtattatga
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