Cuculus canorus (common cuckoo): 104058073
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Entry
104058073 CDS
T08597
Symbol
ABRAXAS1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104058073 (ABRAXAS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104058073 (ABRAXAS1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
104058073 (ABRAXAS1)
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GFIT
Motif
Pfam:
MPN_2A_DUB_like
CHD5
DUF16
REST_helical
DUF948
Spectrin
Motif
Other DBs
NCBI-GeneID:
104058073
NCBI-ProteinID:
XP_053920380
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Position
4:complement(62124065..62132346)
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AA seq
403 aa
AA seq
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MEGESTSALLSGFVFGALAFQHLSTDSDTEGFLLGDVKGEAKNSITDSQMDDVEVVYTID
IQKHIPCYQLFSFYNSAGELNELALKKILSGCKKNVIGWYKFRRNTDQIMTFRERLLHKN
LQSHLSNQGLVFLLLTSSVMTESCSTYRLEHALHRPQEGLFQKVPLVVTNLGMAEQQGYK
TVSGSCVSSVFVRAVRQHRSEFFYEDGSLKEVQKINEMYATLQEELKKISSTVEVSERSV
EKLLAEVSQLKEEIKRKKQQICSGTERDYPGEPKENVFLCQALQTFFPNSGFQTCIVSFK
GQQISKNCCNIDHNINVMDKLTLMVEERDFTKTRHLTKRKVRETTIGSKSFKKSRSLQLH
QKLLQDQEGSDQERKLTPSSTETDEDVLEKNRDTNEYSHSPTF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgagagcacctcagccctgctctcggggttcgtcttcggcgccctcgccttc
cagcacctcagcaccgactcggacacggaaggttttctccttggagatgtgaaaggcgaa
gccaagaacagcattacagactcacagatggatgatgtggaagttgtttatacaattgat
atacagaagcacattccatgctatcagttgttcagcttttataattctgcaggagaacta
aatgaactcgccctgaagaaaatactgtcaggctgcaagaagaatgtaataggatggtac
aaattcagacgtaacacagaccagattatgactttccgggaacgacttcttcataagaat
ttacagtcacacttatcaaatcaaggccttgtattccttttactaacatctagcgtgatg
acagaaagctgttcgacttacagactggagcacgccttgcatcggccccaagaaggtctc
ttccagaaagttcctttggtggttaccaacttgggtatggcagaacagcaaggttacaaa
acagtgtctggttcctgcgtatcttctgtttttgtgagagcagtgagacaacacaggtca
gaattcttttatgaagatggatccttaaaagaggttcagaagataaacgagatgtatgcc
accttgcaagaggaactgaagaagataagctctacagtagaagtcagtgaacgatctgtg
gagaaactcttagcagaggtgagccaattaaaagaagaaataaagaggaaaaagcaacaa
atttgttcaggaacagagagagactacccaggagagccaaaggagaatgttttcctttgt
caggcgctgcaaacatttttccccaattctggatttcagacatgcattgtttccttcaaa
ggccaacagatctccaagaactgctgtaacattgaccataatattaatgtcatggacaaa
ctgactctcatggtggaggaaagagacttcaccaagacaagacacctaaccaagcgtaag
gtcagagagactacgataggatcaaagtcattcaagaaatccagatcactgcagcttcac
caaaaattacttcaagatcaagagggcagtgatcaggaaaggaagcttacgccgagtagc
actgaaacagatgaggatgtgttggaaaaaaatagagacacaaatgaatactcacactcc
cctactttctga
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